Publications

  • Dwyer
  • Gilbert
  • Iredell
  • Meyer
  • O'Sullivan
  • Russell
  • Sintchenko
  • Sorrell

DWYER

 

  1. Kok J, Blyth CC, Foo H, Patterson J, Taylor J, McPhie K, Ratnamohan VM, Iredell JR, Dwyer DE. Comparison of a rapid antigen test with nucleic acid testing during cocirculation of pandemic influenza A/H1N1 2009 and seasonal influenza A/H3N2. Journal of Clinical Microbiology 2010; 48:290-291.
  2. Dean AS, Moffat CRM, Rosewell A, Dwyer DE, Lindley RI, Booy R, MacIntyre CR. Incompletely matched influenza vaccine still provides protection in frail elderly. Vaccine 2010; 28:864-867.
  3. Zhou F, Fanrong Kong F, McPhie K, Ratnamohan M, Gilbert GL, Dwyer DE. Molecular identification and analysis of nonserotypeable human enteroviruses. Journal of Clinical Microbiology 2010; 48:1276-1282.
  4. Rosewell A, Chiu C, Lindley R, Dwyer DE, Moffatt CR, Shineberg C, Clarke E, Booy R, MacIntyre CR. Surveillance for outbreaks of influenza-like illness in the institutionalized elderly. Epidemiology and Infection 2010; 188:1126-1134.
  5. Dalton CB, Cretikos MA, Durrheim DN, Seppelt IM, Rawlinson W, Dwyer DE Comparison of adult patients hospitalized with pandemic (H1N1) 2009 influenza and seasonal influenza during the ‘Protect’ phase of the pandemic response. Medical Journal of Australia 2010; 192: 357-358 (letter).
  6. Blyth CC, Foo H, van Hal, SJ, Hurt AC, Barr IG, McPhie K, Armstrong PK, Rawlinson WD, Shepperd V, Conaty S, Staff M, Dwyer DE, on behalf of the WYD2008 Influenza Study Group. Influenza outbreaks during the World Youth Day 2008 mass gathering. Emerging Infectious Diseases 2010; 16:809-815.
  7. Seale H, Wang Q, Yang P, Dwyer DE, Zhang Y, Wang X, Li X, MacIntyre CR. Influenza vaccination amongst hospital health care workers in Beijing. Occupational Medicine 2010 Apr 23 (epub ahead of print).
  8. Wang B, Dwyer DE, Blyth CC, Soedjono M, Shi H, Kesson A, Ratnamohan M, McPhie K, Cunningham AL, Saksena NK. Detection of the rapid emergence of the H275Y mutation associated with oseltamivir resistance in severe pandemic influenza virus A/H1N1 09 infections. Antiviral Research 2010; 87:16-21.
  9. Szewczuk E, Thapa K, Anninos T, McPhie K, Higgins G, Dwyer DE, Stanley KK, Iredell JR. Rapid semi-automated quantitative multiplex tandem PCR (MT-PCR) assays for the differential diagnosis of influenza-like illness. BMC Infectious Diseases 2010; 10:113.
  10. Iwasenko JM, Cretikos M, Paterson DL, Gibb R, Webb SA, Smith DW, Blyth CC, Dwyer DE, Shi JQ, Robertson P, Rawlinson WD. Enhanced diagnosis of pandemic (H1N1) 2009 influenza infection using molecular and serological testing in intensive care unit patients with suspected influenza. Clinical Infectious Diseases 2010; 51:70-72.
  11. Tramontana AR, George B, Hurt AC, Doyle JS, Langan K, Reid AB, Harper JM, Thursky K, Worth L, Dwyer DE, Morissey O, Johnson PDR, Buising KL, Harrison SJ, Seymour JF, Ferguson PE, Wang B, Denholm JT, Cheng AC, Slavin M. Pandemic influenza A (H1N1) in oncology and hematology populations: spectrum of disease and oseltamivir resistance in hospitalized patients. Emerging Infectious Diseases 2010; 16:1068-1075.
  12. Toi C, Dwyer DE. Prevalence of varicella-zoster virus genotypes in Australia characterised by HRMA and ORF22 gene analyses. Journal of Medical Microbiology 2010; 59:935-940
  13. Seale H, Wang Q, Yang P, Dwyer DE, Zhang Y, Wang X, Li X, MacIntyre CR
    Hospital health care workers’ understanding of and attitudes toward pandemic influenza in Beijing. Asia Pacific Journal of Public Health 2010 May 10 (epub ahead of print).
  14. Tang JW, Lai FYL, Nymadawa P, Deng YM, Ratnamohan VM, Petric M, Loh TP, Tee NWS, Dwyer DE, Barr IG, Wong FYW. A comparison of the incidence of influenza in relation to climate factors during 2000-2007 in five countries. Journal of Medical Virology 2010; 82:1958-1965.
  15. Khandaker G, Doyle B, Dwyer DE, Booy R. Managing outbreaks of viral respiratory infection in aged care facilities – challenges and difficulties during the first pandemic wave. Medical Journal of Australia 2010; 192:722 (letter).
  16. Kirk MD, Moffat CR, Hall GV, Becker N, Booy R, Heron L, MacIntyre R, Dwyer DE, Lindley R. The burden of infectious gastroenteritis in elderly residents and staff of long-term care facilities, Australia. Infection Control and Hospital Epidemiology 2010; 31:860-863.
  17. Gilbert GL, Cretikos MA, Doukas G, Hueston L, O’Toole B, Dwyer DE. Prevalence of influenza A (H1N1) 2009-specific antibodies amongst residents of New South Wales, Australia, after the first wave of the 2009 pandemic in the southern hemisphere. PLoS One 2010; 5:e12562.
  18. Blyth CC, Kelso A, McPhie KA, Ratnamohan VM, Catton M, Druce JD, Smith DW, Williams SH, Huang QS, Lopez L, Schoub BD, Venter M, Dwyer DE. The impact of pandemic (H1N1) 2009 virus on seasonal influenza A viruses in the Southern Hemisphere, 2009. Eurosurveillance 2010; 15:pii=19631.
  19. French MA, Herring BL, Kaldor JM, Sayer DC, Furner V, de Chaneet CC, Dwyer DE. Intrafamilial transmission of HIV-1 infection from individuals with unrecognised HIV-1 infection. AIDS 2003; 17:1-5.
  20. Brotherton JML, Delpech VC, Gilbert GL, Hatzi S, Paraskevopoulos PD, McAnulty JM on behalf of the Cruise Ship Outbreak Investigation Team. A large outbreak of influenza A and B on a cruise ship causing widespread morbidity. Epidemiology and Infection 2003; 130:263-271.
  21. Stich A, Günther S, Drosten C, Emmerich P, Dwyer DE, Hueston L, Hetzel W, Kirschner A, Fleischer K. Clinical and laboratory findings on the first imported case of Murray Valley encephalitis in Europe. Clinical Infectious Diseases 2003; 37:e19-20.
  22. O’Sullivan BG, Levy MH, Dolan KA, Post JJ, Barton SG, Dwyer DE, Kaldor JM, Grulich AE. Hepatitis C transmission and HIV post-exposure prophylaxis (PEP) after needle and syringe sharing in Australian prisons. Medical Journal of Australia 2003; 178:546-549.
  23. Herring BL, Ge YC, Wang B, Ratnamohan M, Zheng F, Cunningham AL, Saksena NK, Dwyer DE. Segregation of human immunodeficiency virus type subtypes by risk factor in Australia. Journal of Clinical Microbiology 2003; 41:4600-4604.
  24. Lang ZW, Zhang LJ, Zhang SJ, Meng X, Li JQ, Song CZ, Sun L, Zhou YS, Dwyer DE. A clinicopathological study of three cases of severe acute respiratory syndrome (SARS). Pathology 2003; 35:526-531.
  25. Amin J, Moore A, Carr A, French MA, Law M, Emery S, Cooper DA on behalf of the OzCombo 1 and 2 investigators. Combined analysis of two year follow-up from two open-label randomised trials comparing efficacy of three nucleoside reverse transcriptase inhibitor backbones for previously untreated HIV-1 infection. HIV Clinical Trials 2003; 4:252-261.
  26. Liang W, Zhu Z, Guo J, Lui Z, He X, Zhou W, Chin DOP, Schuchat A for the Beijing Joint SARS Expert Group. Severe Acute Respiratory Syndrome, Beijing, 2003. Emerging Infectious Diseases 2004; 10:25-31.
  27. Song B, Dwyer DE, Mindel A. HSV type specific serology in sexual health clinics – use, benefit and who gets tested? Sexually Transmitted Infections 2004; 80:113-117.
  28. Cunningham AL and Dwyer DE. The pathogenesis underlying the interaction of HIV and herpes simplex virus after co-infection. Journal of HIV Therapy 2004; 9:9-13.
  29. Charpentier C, Dwyer DE, Mammano F, Lecossier D, Clavel F, Hance AJ. Role of minority populations of human immunodeficiency virus type 1 in the evolution of viral resistance to protease inhibitors. Journal of Virology 2004; 78:4234-4247.
  30. He Z, Dong Q, Zhuang H, Song S, Peng G, Guangxiang L, Dwyer DE. Kinetics of severe acute respiratory syndrome (SARS) coronavirus-specific antibodies in 271 laboratory confirmed cases of SARS. Clinical and Diagnostic Laboratory Immunology 2004; 11:792-794.
  31. Potter SJ, Lemey P, Achaz G, Chew CB, Vandamme AM, Dwyer DE, Saksena NK. HIV-1 compartmentalization in diverse leucocyte populations during antiretroviral therapy. Journal of Leucocyte Biology 2004; 76:1-9.
  32. Herring BL, Cunningham AL, Dwyer DE. Potential drug resistance polymorphisms in the integrase gene of HIV-1 subtype A. AIDS Research and Human Retroviruses 2004; 20:1010-1014.
  33. Harvey L and Dwyer DE. Recent increases in the notification of Barmah Forest virus infections in NSW. NSW Public Health Bulletin 2004; 15:199-204.
  34. Bush K, McAnulty J, McPhie K, Reynolds R, Boomer M, Clarkson LM, Quaine J, Dwyer DE. Antiviral prophylaxis in the management of an influenza outbreak in an aged care facility. Communicable Diseases Intelligence 2004; 28:396-400.
  35. He ZP, Dong Q, Zhuang H, Song S, Peng G, Luo G, Dwyer DE. Effects of severe acute respiratory syndrome (SARS) coronavirus infection on peripheral blood lymphocytes and their subsets. International Journal of Infectious Diseases 2005; 9:323-330.
  36. Young LC, Dwyer DE, Harris M, Guse Z, Noel V, Levy MH on behalf of the Prison Influenza Outbreak Investigation Team. Summer outbreak of respiratory disease in an Australian prison due to an influenza A/Fujian/411/2002(H3N2)-like virus. Epidemiology and Infection 2005; 133:107-112.
  37. Doggett SL, Russell RC, Clancy J, Haniotis J, Hueston L, Marchetti M, Dwyer DE. Arbovirus and vector surveillance in New South Wales 2001-2004. Arbovirus Research in Australia 2005; 9:101-108.
  38. Chew CB, Potter SJ, Wang B, Wang YM, Shaw CO, Dwyer DE, Saksena NK. Assessment of drug resistance mutations in plasma and peripheral blood mononuclear cells at different plasma viral loads in patients receiving HAART. Journal of Clinical Virology 2005; 33:206-216.
  39. Telfer BL, Moberly SA, Hort KP, Branley JM, Dwyer DE, Muscatello DJ, Corell PK, McAnulty JM. A community wide outbreak of psittacosis linked to wild birds. Emerging Infectious Diseases 2005; 11:391-397.
  40. Wang B, Potter SJ, Lin Y, Cunningham AL, Dwyer DE, Su Y, Hou Y, Saksena NK. Rapid and sensitive detection of Severe Acute Respiratory Syndrome coronavirus by rolling circle amplification. Journal of Clinical Microbiology 2005; 43:2339-2344.
  41. Robertson AG, Dwyer DE, Leclerq MG. “Operation South East Asia Tsunami Assist”: an Australian team in the Maldives. Medical Journal of Australia 2005; 182:340-342.
  42. Winston A, Hales G, Amin J, van Schaick E, Cooper DA, Emery S on behalf of the CREST Investigators. The normalized inhibitory quotient of boosted protease inhibitors is predictive of viral load response in treatment-experienced HIV-1 infected individuals. AIDS 2005; 19:1393-1399.
  43. Potter SJ, Lemey P, Dyer WB, Sullivan JS, Chew CB, Vandamme A-M, Dwyer DE, Saksena NK. Genetic analyses reveal structured HIV-1 populations in serially sampled T lymphocytes of patients receiving HAART. Virology 2006; 348:35-46.
  44. Sanders SA, Herrero LJ, McPhie K, Chow SSW, Craig ME, Dwyer DE, Rawlinson W, McMinn PC. Molecular epidemiology of enterovirus 71 over two decades in an Australian urban community. Archives of Virology 2006; 151:1003-1013.
  45. Spruance SL, Bodsworth N, Resnick H, Conant M, Oeuvray C, Gao J, Hamed K. The Famvir Study Group. Single-dose, patient-initiated famciclovir: A randomized, double-blind, placebo-controlled trial for episodic treatment of herpes labialis. Journal of the American Academy of Dermatology 2006; 55:47-53.
  46. Haddow L, Dave B, Mindel A, Chung C, Marks C, Dwyer DE. Increase in rates of herpes simplex type 1 as a cause of anogenital herpes in western Sydney, Australia between 1979 and 2003. Sexually Transmitted Infections 2006; 82:255-259.
  47. Hales G, Birch C, Crowe S, Workman C, Hoy JA, Law MG, Kelleher AD, Lincoln D, Emery S on behalf of the CREST Investigators. A randomised trial comparing genotypic and virtual interpretation of HIV drug resistance: The CREST study. Public Library of Science (PLoS) Clinical Trials 2006; 1(3):e18. DOI:10.1371/journal.pctr.0010018.
  48. Weston KM, Dwyer DE, Ratnamohan M, McPhie K, Chan SW, Branley JM, Allchin LJ, Hort KP. Nosocomial and community transmission of measles virus genotype D8 imported by a returning traveller from Nepal. Communicable Diseases Intelligence 2006; 30:358-365.
  49. Seale H, MacIntyre CR, Gidding HF, Backhouse JL, Dwyer DE, Gilbert GL. Seroepidemiology of cytomegalovirus infection in Australia. Clinical and Vaccine Immunology 2006; 13:1181-1184.
  50. INITIO Trial International Co-ordinating Committee. Virological and immunological outcomes at 3 years after starting antiretroviral therapy with regimens containing non-nucleoside reverse transcriptase inhibitor, protease inhibitor, or both in INITIO: open-label, randomised trial. Lancet 2006; 368:287-298.
  51. Dwyer DE, Workman C, Hales G, Amin J, Cooper D, John Miller J, Emery S on behalf of the ALLIANCE Study Group. Enfuvirtide in HIV-1 infected individuals changing therapy to a nucleoside reverse transcriptase inhibitor sparing regimen: The ALLIANCE Study. Antiviral Therapy 2006; 11:409-419.
  52. The Strategies for Management of Antiretroviral Therapy (SMART) Study Group. CD4+ count-guided interruption of antiretroviral treatment. New England Journal of Medicine 2006; 355:2283-2296.
  53. He ZP, Zhuang H, Zhao C, Dong Q, Peng G, Dwyer DE. Using patient-collected clinical samples and sera to detect and quantify the severe acute respiratory syndrome coronavirus (SARS-CoV). Virology Journal 2007; 4:32 doi:10.1186/1743-422X-4-32.
  54. Wand H, Calmy A, Carey DL, Samaras K, Carr A, Law MG, Cooper DA, Emery S; on behalf of the INITIO Trial International Coordinating Committee. Metabolic syndrome, cardiovascular disease and type 2 diabetes mellitus after initiation of antiretroviral therapy in HIV infection. AIDS 2007; 21:2445-2453.
  55. Seale H, MacIntyre CR, Dwyer DE, Wang H. The changing epidemiology of severe cytomegalovirus disease in Australia. Human Vaccines 2007; 6:239-244.
  56. Wang B, Lau KA, Ong L-Y, Shah M, Steain MC, Foley B, Dwyer DE, Chew CB, Kamarulzaman A, Ng KP, Saksena NK. Complex patterns of the HIV-1 epidemic in Kuala Lumpur, Malaysia: Evidence for expansion of circulating recombinant form CRF33_01B and detection of multiple other recombinants. Virology 2007; 367:288-297.
  57. Swaminathan A, Martin R, Gamon S, Aboltins C, Athan E, Braitberg G, Catton M, Cooley L, Dwyer DE, Edmonds D, Eisen D, Hosking K, Hughes A, Johnson PDR, McLeod A, O’Reilly M, Peters E, Stuart RL, Moran R, Grayson ML. Quantifying personal protective equipment (PPE) and antiviral use during the initial acute management of suspected human cases of pandemic influenza. Emerging Infectious Diseases 2007; 13:1541-1547.
  58. Verity EE, Zotos D, Wilson K, Chatfield C, Lawson VA, Dwyer DE, Cunningham A, Learmont J, Dyer W, Sullivan J, Churchill M, Wesselingh SL, Gabuzda D, Gorry PR, McPhee DA. Viral phenotypes and antibody responses in long-term survivors infected with attenuated human immunodeficiency virus type 1 containing deletions in the nef and long terminal repeat region. Journal of Virology 2007; 81: 9268-9278.
  59. Bucciardini R, Fragola V, Massella M, Polizzi C, Mirra M, Goodall R, Carey D, Hudson F, Zajdenverg R, Floridia M on behalf of the INITIO Trial International Coordinating Committee. Health-Related Quality of Life Outcomes in HIV-infected patients starting different combination regimens in a randomized multinational trial: The INITIO-QoL Substudy. AIDS Research and Human Retroviruses 2007; 23:1215-22.
  60. Wu JQ, Wang B, Belov L, Chrisp J, Learmont J, Dyer WB, Zaunders J, Cunningham AL, Dwyer DE, Saksena NK. Antibody microarray analysis of cell surface antigens on CD4+ and CD8+ T cells from HIV+ individuals correlates with disease stages. Retrovirology. 2007; 4:83; doi:10.1186/1742-4690-4-83.
  61. Carey DL, Baker D, Rogers GD, Petoumenos K, Chuah J, Easey N, Machon K, Cooper DA, Emery S, Carr A for the Facial LipoAtrophy Study in HIV (FLASH) Investigators. A randomized, multicenter, open-label study of poly-L-lactic acid for HIV-1 facial lipoatrophy. Journal of the Acquired Immune Deficiency Syndrome 2007; 46:581-589.
  62. Viney KA, Kehoe PJ, Doyle B, Sheppeard V, Roberts-Witteveen AR, Semirli H, McPhie K, Dwyer DE, McAnulty JM. An outbreak of epidemic keratoconjunctivitis in a regional opthalmology clinic in New South Wales. Epidemiology and Infection 2008; 136:1197-1206.
  63. Ho YS, Abecasis AB, Theys K, Deforche K, Dwyer DE, Charleston M, Vandamme AM, Saksena NK. HIV-1 gp120 N-Linked glycosylation differs between plasma and leukocyte compartments. Virology Journal 2008, 5:14; doi:10.1186/1743-422X-5-14.
  64. Zhou L, Ng T, Yuksel A, Wang B, Dwyer DE, Saksena NK. Absence of HIV infection in the choroid plexus of two patients who died rapidly with HIV-associated dementia. AIDS Research and Human Retroviruses 2008; 24:839-843.
  65. Branley J, Roy B, Dwyer DE, Sorrell TC. Real-time PCR detection and quantitation of Chlamydophilia psittaci in human and avian specimens from a veterinary clinic cluster. European Journal of Clinical Microbiology and Infectious Diseases 2008; 27:269-273.
  66. Boyd MA, Truman M, Hales G, Anderson J, Dwyer DE, Carr A. A randomized study to evaluate injection site reactions using three different mechanisms for delivery of enfuvirtide: a 27-gauge needle, a 31-gauge needle and a needle-free device (The OPTIONS Study). Antiviral Therapy 2008; 13:449-453.
  67. Strategies for Management of Antiretroviral Therapy (SMART) Study Group, Emery S, Neuhaus JA, Phillips AN, Babiker A, Cohen CJ, Gatell JM, Girard PM, Grund B, Law M, Losso MH, Palfreeman A, Wood R. Major clinical outcomes in antiretroviral therapy (ART)-naive participants and in those not receiving ART at baseline in the SMART study. Journal of Infectious Diseases 2008; 197:1133-1144.
  68. Strategies for Management of Antiretroviral Therapy (SMART) Study Group, Lundgren JD, Babiker A, El-Sadr W, Emery S, Grund B, Neaton JD, Neuhaus J, Phillips AN. Inferior clinical outcome of the CD4+ cell count-guided antiretroviral treatment interruption strategy in the SMART study: role of CD4+ Cell counts and HIV RNA levels during follow-up. Journal of Infectious Diseases 2008; 197:1145-1155.
  69. Ortiz R, DeJesus E, Khanlou H, Voronin E, van Lunzen J, Andrade-Villanueva J, Fourie J, De Meyer S, De Pauw M, Lefebvre E, Vangeneugden T, Spinosa-Guzman S. Efficacy and safety of once-daily darunavir/ritonavir versus lopinavir/ritonavir in treatment-naive HIV-1-infected patients at week 48. AIDS 2008; 22: 1389–1397.
  70. Toi CS, Dwyer DE. Differentiation between vaccine and wild-type varicella-zoster virus genotypes by high resolution melt analysis of single nucleotide polymorphisms. Journal of Clinical Virology 2008; 43:18-24.
  71. Wu JQ, Dwyer DE, Dyer WB, Yang YH, Wang B, Saksena NK. Transcriptional profiles in CD8+ T cells from HIV+ progressors on HAART are characterized by coordinated up-regulation of oxidative phosphorylation enzymes and interferon responses. Virology 2008; 380:124-135.
  72. Seale H, Dwyer DE, Chapman J, MacIntyre CR. Cytomegalovirus disease amongst renal transplant recipients in Australia and New Zealand. Virology: Research and Treatment 2008; 1:65-73.
  73. El-Sadr WM, Grund B, Neuhaus J, Babiker A, Cohen CJ, Darbyshire J, Emery S, Lundgren JD, Phillips A, Neaton JD for the SMART Study Group. Risk for opportunistic disease and death after reinitiating continuous antiretroviral therapy in patients with HIV previously receiving episodic therapy: a randomized trial. Annals of Internal Medicine 2008; 149:289-299.
  74. The SMART/INSIGHT and the D:A:D Study Groups. Use of nucleoside reverse transcriptase inhibitors and risk of myocardial infarction in HIV-infected patients. AIDS 2008; 22:F17-F24.
  75. Gulick RM, Lalezari J, Goodrich J, Clumeck N, DeJesus E, Horban A, Nadler J, Clotet B, Karlsson A, Wohlfeiler M, Montana JB, McHale M, Sullivan J, Ridgway C, Felstead S, Dunne MW, van der Ryst E, Mayer H, for the MOTIVATE Study Teams. Maraviroc for previously treated patients with R5 HIV-1 infection. New England Journal of Medicine 2008; 359:1429-1441.
  76. Fätkenheuer G, Nelson M, Lazzarin A, Konourina I, Hoepelman AIM, Lampiris H, Hirschel B, Tebas P, Raffi F, Trottier B, Bellos N, Saag M, Cooper DA, Westby M, Tawadrous M, Sullivan JF, Ridgway C, Dunne MW, Felstead S, Mayer H, van der Ryst E, for the MOTIVATE 1 and MOTIVATE 2 Study Teams. Subgroup analyses of maraviroc in previously treated R5 HIV-1 infection. New England Journal of Medicine 2008; 359:1442-1455.
  77. Fox Z, Phillips A, Cohen C, Neuhaus J, Baxter J, Emery S, Hirschel B, Hullsiek KH, Stephan C, Lundgren J on behalf of the SMART Study Group. Viral resuppression and detection of drug resistance following interruption of a suppressive non-nucleoside reverse transcriptase inhibitor-based regimen. AIDS 2008; 22:2279-2289.
  78. Seale H, Dwyer DE, MacIntyre CR. Reduction in hospitalisation for cytomegalovirus disease in HIV-infected patients before and after the introduction of highly active antiretroviral therapy. The Open Epidemiology Journal 2008; 1:49-53.
  79. Sheppeard V, Forsmann B, Ferson MJ, Moreira C, Campbell-Lloyd S, Dwyer DE, McAnulty JM. The effectiveness of prophylaxis for measles contacts in NSW. NSW Public Health Bulletin 2009; 20:81-85.
  80. Seale H, Weston KM, Dwyer DE, Zhu M, Allchin L, Booy R, MacIntyre CR. The use of oseltamivir during an influenza B outbreak in a chronic care hospital. Influenza and Other Respiratory Viruses 2009; 3:15-20.
  81. Mocroft A, Wyatt C, Szczech L, Neuhaus J, El-Sadr W, Tracy R, Kuller L, Shlipak M, Angus B, Klinker H, Ross M for the INSIGHT SMART Study Group. Interruption of antiretroviral therapy is associated with increased plasma cystatin C. AIDS 2009; 23:71-82.
  82. MacIntyre CR, Cauchemez S, Dwyer DE, Seale H, Cheung P, Browne G, Fasher M, Wood J, Gao Z, Booy R, Ferguson N. Face mask use and control of respiratory virus transmission in households. Emerging Infectious Diseases 2009; 15:233-241.
  83. Italiano C, Toi CS, Chan SP, Dwyer DE. Prolonged varicella viraemia and streptococcal toxic shock syndrome following varicella vaccination of a health care worker. Medical Journal of Australia 2009; 190:451-453.
  84. Osbourn M, McPhie K, Ratnamohan M, Dwyer DE, Durrheim DN. Outbreak of human metapneumovirus infection in a residential aged care facility. Communicable Diseases Intelligence 2009; 33:38-40.
  85. Taylor J, McPhie K, Druce J, Birch C, Dwyer DE. Evaluation of twenty rapid antigen tests for the detection of human influenza A H5N1, H3N2, H1N1 and B viruses. Journal of Clinical Virology (in press)
  86. van Hal SJ, Herring B, Deris Z, Wang B, Saksena NK, Dwyer DE. HIV-1 integrase polymorphisms are associated with prior antiretroviral drug exposure. Retrovirology 2009, 6:12 doi:10.1186/1742-4690-6-12.
  87. Hurt AC, Ernest J, Deng YM, Iannello P, Besselaar TG, Birch C, Buchy P, Chittaganpitch M, Chiu SC, Dwyer D, Guigon A, Harrower B, Kei IP, Kok T, Lin C, McPhie K, Mohd A, Olveda R, Panayoto T, Rawlinson W, Scott L, Smith D, D’Souza H, Komadina N, Shaw R, Kelso A, Barr IG. Emergence and spread of oseltamivir-resistant A(H1N1) influenza viruses in Oceania, South East Asia and South Africa. Antiviral Research 2009, 83: 90-93.
  88. Sheppeard V, Forsmann B, Ferson MJ, Moreira C, Campbell-Lloyd S, Dwyer DE, McAnulty JM. Vaccine failures and vaccine effectiveness in children during measles outbreaks in NSW, March-May 2006. Communicable Diseases Intelligence 2009; 33:21-26.
  89. Cross NB, Webster, O’Connell P, Jeoffreys N, Dwyer DE, Craig JC. Diagnostic accuracy of blood qualitative nucleic acid testing for polyomavirus-associated nephropathy in kidney recipients. Nephrology 2009; 14:350-356.
  90. Carey DL, Baker D, Petoumenos K, Chuah J, Rogers GD, Watson J, Cooper DA, Emery S, Carr A for the Facial LipoAtrophy Study in HIV (FLASH) Investigators. Poly-L-lactic acid for HIV-1 facial lipoatrophy: 48-week follow-up. HIV Medicine 2009; 10:163-172.
  91. Dean AS, Moffat CRM, Rosewell A, Dwyer DE, Lindley RI, Booy R, MacIntyre CR. Incompletely matched influenza vaccine still provides protection in frail elderly. Vaccine 2009; doi:10.1016/j.vaccine.2009.03.024.
  92. Seale H, Corbett S, Dwyer DE, MacIntyre CR. Feasibility exercise to evaluate the use of particulate respirators by emergency department staff during the 2007 influenza season. Infection Control and Hospital Epidemiology 2009; 30: 710-712.
  93. Wang B, Dwyer DE, Chew CB, Kol C, He ZP, Joshi H, Steain MC, Cunningham AL, Saksena NK. Sensitive detection of the K103N non-nucleoside reverse transcriptase inhibitor resistance mutation in treatment-naïve HIV-1 infected individuals by Rolling Circle Amplification. Journal of Virological Methods 2009; doi:10.1016/j.jviromet.2009.06.004.
  94. Zhou F, Kong F, McPhie K, Ratnamohan M, Donovan L, Zeng F, Gilbert GL, Dwyer DE. Identification of 20 common human enterovirus serotypes using a RT-PCR-based reverse line blot hybridization assay. Journal of Clinical Microbiology (in press).
  95. Iskander M, Kesson A, Dwyer DE, Rost L, Pym M, Wang H, McCaskill M, Booy R. The burden of influenza in children under 5 years admitted to The Children’s Hospital at Westmead in the winter of 2006. Journal of Paediatrics and Child Health (in press).
  96. Cheng AC, Dwyer DE, Kotsimbos TC, Starr M, Korman TM, Buttery JP, Jenkins CR, Krause VL, Johnson PDR. Australasian Society for Infectious Diseases/Thoracic Society of Australia and New Zealand Guidelines: Treatment and prevention of H1N1 influenza 09 (human swine influenza) with antiviral agents. Medical Journal of Australia Rapid Online Publication 18 June 2009.
  97. Steain MC, Dwyer DE, Hurt AC, Kol C, Saksena NK, Cunningham AL, Wang B. Detection of influenza A H1N1 and H3N2 mutations conferring resistance to oseltamivir using rolling circle amplification. Antiviral Research (in press).
  98. van Hal SJ, Foo H, Blyth CC, McPhie K, Armstrong P, Sintchenko V, Dwyer DE. Influenza outbreak during Sydney World Youth Day 2008: the utility of laboratory testing and case definitions on mass gathering outbreak containment. PLoS ONE (in press).
  99. Seale H, Dwyer DE, Cowling B, Wang Q, Yang P, MacIntyre CR. A review of medical masks and respirators for use during pandemic influenza. Influenza and Other Respiratory Viruses (in press)

GILBERT

  1. Gilbert, G. L., I. Kerridge, P. Cheung, Mandatory influenza immunisation of health-care workers. The Lancet Infectious Diseases 2010; 10:3-5.
  2. Kurniawan, J., R. P. Maharjan, W. F. Chan, P. R. Reeves, V. Sintchenko, G. L. Gilbert, F. R. Mooi, R. Lan.. Bordetella pertussis clones identified by multilocus variable-number tandem-repeat analysis. Emerging Infectious Diseases 2010; 16:297-300.
  3. Cai L, Kong F, Toi C, van Hal S, Gilbert GL (2010) Differentiation of Chlamydia trachomatis lymphogranuloma venereum-related serovars from other serovars using multiplex allele-specific polymerase chain reaction and high-resolution melting analysis. International Journal of STD & AIDS 21: 101-104.
  4. Quinn HE, McIntyre PB, Backhouse JL, Gidding HF, Brotherton J, Gilbert GL. The utility of seroepidemiology for tracking trends in pertussis infection. Epidemiol Infect, 2010; 138: 426-433.
  5. Xu X, Cai L, Xiao M, Kong F, Oftadeh S, Zhou F, Gilbert GL. Distribution of serotypes, genotypes and resistance determinants among macrolide-resistant Streptococcus pneumoniae. Antimicrob Ag Chemother 2010; 54:1151-9
  6. Marsh R, Smith-Vaughan H, Hare KM, Binks M, Kong F, Warning J, Gilbert GL, Morris P, Leach AJ. The non-serotypeable pneumococcus: phenotypic dynamics in the era of anti-capsular vaccines. J Clin Microbiol 2010; 48: 831-5  
  7. Zhou F, Kong F, McPhie K, Ratnamohan M, Gilbert GL, Dwyer DE, Molecular identification and analysis of nonserotypeable human enteroviruses. J. Clin. Microbiol. 2010; 48: 1276 - 1282.
  8. Wang H, Kong F, Wang B, Mckechnie ML, Gilbert GL. Multiplex PCR-based reverse line blot hybridization (RLB) assay to detect common genital pathogens. Int J STD & AIDS 2010; 21: 320-325
  9. Gallego B, Sintchenko V, Jelfs P, Coiera E, Gilbert GL. Three year longitudinal study of genotypes of Mycobacterium tuberculosis in a low prevalence population. Pathology 2010; 42:267-27
  10. Couldwell DL, Gidding HF, Freedman EV, McKechnie ML, Biggs K, Sintchenko V, Gilbert GL.  Ureaplasma urealyticum is significantly associated with non-gonococcal urethritis Int J STD & AIDS 2010; 21: 337-341.
  11. Jardine A, Deeks SL, Patel MS, Menzies RI, Gilbert GL, McIntyre PB. An evaluation of the Australian National Serosurveillance Program. Communicable Diseases Intelligence. 2010;34: 29-36.
  12. O’Sullivan MVN, Kong F, Sintchenko V, Gilbert G.L. Rapid identification of MRSA transmission in hospitals using phage-derived ORF typing enhanced by multiplex PCR and reverse line blot assay
    J. Clin. Microbiol.
    2010; 48: 2741 - 2748
  13. Oftadeh S, Satzke C, Gilbert G.L. Identification of the newly described Streptococcus pneumoniae serotype 6D using Quellung reaction and PCR. J. Clin. Microbiol. 2010;48:3378-79
  14. Liu Y, Kong F, Xiao M, Wang Q, O’Sullivan MVN, Sintchenko V, Ma L, Gilbert GL. Unexpected diversity of staphylococcal cassette chromosome mec (SCCmec) type IV in methicillin-resistant Staphylococcus aureus J Clin Microbiol 2010 published ahead of print 4 Aug 2010 doi: doi:10.1128/JCM.00351-10
  15. Satzke C, Ortika BD, Oftadeh S, Russell FM, Robins-Browne R, Mulholland EK, Gilbert GL. Molecular epidemiology of Streptococcus pneumoniae serogroup 6 isolates from Fijian children, including newly identified serotypes 6C and 6D. J Clin Microbiol 2010; 48 published ahead of print 1 September 2010, doi:10.1128/JCM.00861-10
  16. Gilbert GL, Cretikos MA, Hueston L, Doukas G, O’Toole B, Dwyer DE. Influenza A (H1N1) 2009 Antibodies in residents of New South Wales, Australia, after the first pandemic wave in the 2009 southern hemisphere winter. PLoS One (in press; accepted Aug 10)
  17. Strachan RE, Cornelius A, Gilbert GL, Gulliver T, Martin A, McDonald T, Nixon G, Roseby R, Ranganathan S, Selvadurai H, Smith G, Soto-Martinez M, Sadasivum S, Teoh L, Thapa K, Wainwright CE, Jaffé A.  A bedside assay to detect Streptococcus pneumoniae in children with empyema. Pediatric Pulmonology (in press accepted 16/8/10 Manuscript PPUL-10-0177.R2
  18. Octavia S, Maharjan S, Sintchenko V, Stevenson G, Reeves P, Gilbert GL, Lan R. Insight into evolution of Bordetella pertussis from comparative genomic analysis: vaccine-driven selection of a major clone? Mol Biol Evol (in press accepted
  19. Booy R, Khandakar G, Heron L, Yin J, Doyle B, Tudo K, Hueston L, Gilbert GL, McAnulty J, Lindley R, Macintyre CR, Dwyer DE. Cross-reacting antibodies against pandemic influenza A (H1N1) 2009 virus among elderly Australians (in press MJA accepted September 15th 2010).
  20. Kong F, Martin D, James G, Gilbert GL. Towards a genotyping system for Streptococcus agalactiae (group B streptococcus): use of mobile genetic elements in invasive Australasian isolates. J Med Microbiol 2003;52:1-8.
  21. Gilbert GL, Hewitt MC, Turner CM, Leeder SR. Compliance with protocols for prevention of neonatal group B streptococcal sepsis – practicalities and limitations. Infect Dis Obstet Gynecol 2003;11:1-9
  22. Gilbert G.L. Preventing perinatal group B streptococcal infection – the jury is still out. Med J Aust 2003;177;199-200.
  23. Brotherton JML, Delpech VC, Gilbert GL, Hatzi S, Paraskevopoulos PD, McAnulty JM. A large outbreak of influenza A and B on a cruise ship causing widespread morbidity. Epidemiol Infect 2003; 130:263-271.
  24. Gidding HF, MacIntyre CR, Burgess MA, Gilbert GL. The seroepidemiology and transmission dynamics of varicella in Australia. Epidemiology and Infection. 2003;131:1085-1089.
  25. Tarnow-Mordi, W., D. Isaacs, G. Gilbert, N. Athayde, F. Stanley. Effect of oral clindamycin on late miscarriage and preterm delivery (Letter). Lancet, 2003. 361: 2161.
  26. Kong F, Gilbert G.L. Using cpsA-cpsB sequence polymorphisms and serogroup/serotype-specific PCR to predict 51 Streptococcus pneumoniae serotypes. J Med Microbiol 2003;52:1047-1058.
  27. Watson M, Bayley K, Bell JM, Gilbert G.L, et al.. Laboratory surveillance of invasive pneumococcal disease in Australia in 2001 to 2002—implications for vaccine serotype coverage. Comm Dis Intell 2003;27:478-87
  28. James G, Yuen M, Gilbert G.L. Laboratory investigation of suspected bioterrorism incidents, NSW October 2001 to February 2002. NSW Public Health Bulletin 2003;14:221-233
  29. O’Sullivan BG, Law M, Gidding H, Kaldor JM, Gilbert GL, Dore GJ. Estimates of chronic hepatitis B virus infection in Australia, 2000. Aust NZ J PH 2004; 28:212-6.
  30. Nguyen NL, Gilbert GL, Marks GB. Molecular epidemiology of tuberculosis and recent developments in understanding the epidemiology of tuberculosis. Respirol 2004; 9:313-310
  31. Sintchenko V, Coiera E, Iredell JR, Gilbert GL. Comparative impact of guidelines, clinical data and decision support on prescribing decisions: an interactive web experiment with simulated cases. JAMIA 2004;11:71-77.
  32. Wang H, Kong F, Jelfs P, James G, Gilbert G.L. Simultaneous detection and identification of common cell culture contaminant and pathogenic mollicutes by reverse line blot (RLB) hybridisation. Appl Environ Microbiol 2004;70:1483-6.
  33. Watson M. Roche P. Bayley K. Bell JM. Collignon P. Gilbert GL. et al. Laboratory surveillance of invasive pneumococcal disease in Australia, 2003 predicting the future impact of the universal childhood conjugate vaccine program. Comm Dis Intell. 2004; 28:455-64.
  34. Poynten M, McIntyre PB, Mooi FR, Heuvelman KJ, Gilbert GL. Temporal trends in circulating Bordetella pertussis in Australia. Epidemiol Infect 2004;132:185-93.
  35. Raynes-Greenow CH, Roberts CL, Bell JC, Peat B, Gilbert GL. Antibiotic for ureaplasma in the vagina in pregnancy. [Systematic Review] Cochrane Pregnancy and Childbirth Group Cochrane Database of Systematic Reviews. 2, 2004.
  36. Kong F, Gilbert GL. Postgenomic taxonomy of human ureaplasmas- a case study based on multiple gene sequences. Internat J Sytem Evolut Microbiol 2004 ;54:1815-21
  37. Amin J, Gidding HF, Gilbert GL, Backhouse J, Kaldor JM, Dore GJ, Burgess MA, Hepatitis C prevalence – a nationwide serosurvey. Comm Dis Iintell 2004;28:517-21
  38. Gilbert GL. Are group B streptococcal infections vaccine preventable? Exp Rev Vaccines 2004; 3:371-374.
  39. Gidding HF, Backhouse JL, Gilbert GL, Burgess MA National serosurvey of poliovirus immunity in Australia, 1996 – 1999 Aust NZ J Pub Health 2005;29:48-52
  40. Gilbert GL, Gidding HF, Backhouse, McIntyre PB. Varicella seroprevalence and vaccine uptake in preschool children. Med J Aust 2004, Med J Aust, 2005;182:42
  41. Horby P, MacIntyre CR, McIntyre PB, Gilbert G.L, Staff M, Hanlon M, Cagney M, Bennett C. A boarding school outbreak of pertussis in adolescents: value of laboratory diagnostic methods. Epidemiol Infect 2005;133:229-36.
  42. Kong F, Wang W, Tao J, Wang L, Sabananthan A , Gilbert GL. A molecular capsular type prediction system for 90 Streptococcus pneumoniae serotypes using partial cpsA-cpsB sequencing and wzy or wzx -specific PCR. J Med Microbiol 2005;54:351-356
  43. Sintchenko V, Iredell J R, Gilbert GL, Coiera EW. Mobile access to evidence-based clinical decision support help reduce patient length of stay and antibiotic prescribing in critical care. JAMIA 2005;12:398-412.
  44. Sun Y, Kong F, Zhao Z, Gilbert GL. Comparison of a three-set genotyping system with multilocus sequence typing for Streptococcus agalactiae (group B streptococcus). J Clinical Microbiol 2005; 43:4704-7.
  45. Britton WJ, Gilbert GL, Wheatley J, Leslie D, Rothel JS, Jones SL, Bradley P. Sensitivity of human gamma interferon assay and tuberculin skin testing for detecting infection with Mycobacterium tuberculosis in patients with culture positive tuberculosis. Tuberculosis, 2005;85:137-45
  46. Wood N, Backhouse J, Gidding HF, Gilbert GL, Lum G, McIntyre P. Estimates of chronic hepatitis B virus infection in the Northern Territory. Comm Dis Intell 2005;29:289-90
  47. Kong F, Ma L, Gilbert GL. Simultaneous detection and serotype identification of Streptococcus agalactiae using multiplex PCR and reverse line blot (RLB) hybridization J Med Microbiol 2005;54:1133-8
  48. Gidding, HF, Backhouse JL, Burgess MA, Gilbert GL. Assessment of immunity to diphtheria and tetanus in Australia by a national serosurvey. Med J Aust. 2005; 143:301-304
  49. Zeng X, Kong K, Wang H, Darbar A, Gilbert G.L. Simultaneous detection of nine antibiotic resistance-related genes in Streptococcus agalactiae using multiplex PCR and reverse line blot hybridization assay Antimicrob Ag Chemother 2006;50:204-9
  50. Backhouse J.L, H.F. Gidding, P.B. McIntyre,, Gilbert GL.. Evaluation of two enzyme immunoassays for detection of immunoglobulin G antibodies to mumps virus. Clin Diag Lab Immunol 2006;13:764-7
  51. Zhao Z, Kong F, Gilbert GL. Reverse line blot (RLB) assay for direct identification of seven Streptococcus agalactiae major surface protein antigen genes.Clin Diag Lab Immunol 2006; 13: 145-9
  52. Kong F, Gidding HF, Berner, Gilbert GL. Streptococcus agalactiae C protein gene (bac) cell wall-spanning sequence types: their relationship to virulence and a proposed standardized nomenclature. J Med Microbiol 2006; 55:829-37
  53. Xiong L. Kong F, Zhou H, Gilbert G.L. Rapid simultaneous detection and serovar identification of Chlamydia trachomatis using polymerase chain reaction and reverse line blot hybridization assay J Clin Microbiol; 2006; 44:1413-1418
  54. Jelfs P, Sintchenko V, Gilbert GL. Genotyping of Mycobacterium tuberculosis in New South Wales: Results from 18 months of statewide trial. NSW Public Health Bulletin 2006; 17:82-85
  55. Sintchenko V, Gilbert GL. Utility of genotyping of Mycobacterium tuberculosis in the contact investigation: A decision analysis. Tuberculosis 2007;87:176-84
  56. Unicomb LE, Ferguson J, Stafford RJ, Ashbolt R, Kirk MD, Becker NG, Patel MS, Gilbert GL, Valcanis,G, Mickan L and the Australian Campylobacter Subtyping Study Group. Low level of fluoroquinolone resistance among Campylobacter jejuni isolates in Australia. Clin Infect Dis 2006; 42: 1368-74
  57. Wen L, Wang, Q, Li, Y Kong F, Gilbert GL, Cao, B Wang, L Feng L. Identification of group B streptococcus (Streptococcus agalactiae) using a serotype-specific DNA microarray. J Clin Microbiol 2006 44;1447-1452
  58. Sintchenko V, Jelfs P, Dally M, Crighton T. Gilbert GL. A case of urinary tuberculosis due to Mycobacterium bovis subsp. caprae Pathology 2006;38: 376-7
  59. Gilbert GL, Zeng X, Zhao Z, Gidding H, Kong F. Genotyping of group B streptococcus and risk assessment for invasive infection. In: ICS 1298 Streptococci – New Insights into an Old Enemy. ISBN 0-444-52205-0 2006; pp 66-70.
  60. Zeng X, Kong F, Morgan J, Gilbert GL Evaluation of a multiplex PCR based reverse line blot hybridization (mPCR/RLB) for identification of serotype and surface protein antigens of Streptococcus agalactiae (group B streptococcus, GBS) J Clin Microbiol 2006; 44:3822-5
  61. Kong F, Brown M, Sabananthan A, Zeng X, Gilbert GL. A multiplex PCR-based reverse line blot hybridization (mPCR/RLB) assay to identify 23 Streptococcus pneumoniae polysaccharide vaccine serotypes. J Clin Microbiol 2006;44 (5):1887-1891
  62. Collignon P, Wilkinson I, Gilbert GL, Grayson L, Whitby M. Healthcare associated Staphylococcus aureus blood stream infections – a clinical quality indicator for all hospitals Med J Aust 2006; 184:404-6.
  63. Xiong L , Kong F, Yang Y Cheng J, Gilbert GL. Use of PCR and reverse line blot hybridization macroarray, based on 16S-23S rDNA internal transcribed spacer sequences, for rapid identification of 34 Mycobacterium species J Clin Microbiol 2006; 44:3544-50
  64. Zhao Z, Kong F, Martinez G, Zeng X, Gottschalk M, Gilbert GL. Molecular serotype identification of Streptococcus agalactiae of bovine origin by multiplex PCR-based reverse line blot assay. FEMS Micobiol Lett 2006; 263:236-9
  65. O’Sullivan M.V.N, Cai Y, Zeng X, Kong F, Gilbert G.L. The influence of disk separation distance on the accuracy of disk approximation testing for inducible clindamycin resistance in Staphylococcus spp. J Clin Microbiol 2006;44:4072-6
  66. Seale H, MacIntyre CR, Gidding HF, Backhouse JL, Dwyer DE, Gilbert L. National serosurvey of cytomegalovirus in Australia. Clin Vaccine Immunol 2006;13:1181-4
  67. Kong F, Gilbert GL. Multiplex PCR-based reverse line blot hybridization assay (mPCR/RLB) – a practical epidemiological and diagnostic tool. Nature Protocols 2006;1:2668-2680
  68. Ip M , Cheuk ESC, Tsui MHY, Kong F, Leung DTN Gilbert GL. Identification of a Streptococcus agalactiae serotype III subtype 4 clone in association with adult invasive disease in Hong Kong. J Clin Microbiol 2006 44:4252-4
  69. Hoile R, Yuen M, James G, Gilbert GL. Evaluation of the rapid analyte measurement platform (RAMP) for the detection of Bacillus anthracis at a crime scene. Foren Sci Internation 2007; 171:1-4
  70. Merritt A, Sintchenko V, Jelfs P, Worthing M, Robinson B, Durrheim DN, Gilbert GL. Outbreak of pulmonary tuberculosis in young vulnerable Australians. Med J Aust 2007;186:240-2
  71. Backhouse JL, Gidding HF, MacIntyre CR, McIntyre PB, Gilbert GL. Population-based seroprevalence of Neisseria meningitidis serogroup C capsular antibody before the introduction of conjugate vaccine, in Australia. Vaccine 2007;25(7):1310-5.
  72. Bishop EJ, Shilton C, Benedict S, Kong F, Gilbert GL, Gal D, et al. Necrotizing fasciitis in captive juvenile Crocodylus porosus caused by Streptococcus agalactiae: an outbreak and review of the animal and human literature. Epidemiol Infect 2007;135(8):1248-55.
  73. Cai Y, Kong F, Wang Q, Tong Z, Sintchenko V, Zeng X, Gilbert GL. Comparison of single- and multilocus sequence typing and toxin gene profiling for characterization of methicillin-resistant Staphylococcus aureus. J Clin Microbiol 2007;45(10):3302-8.
  74. Cai Y, Kong F, Gilbert GL. Three new macrolide efflux (mef) gene variants in Streptococcus agalactiae. J Clin Microbiol 2007;45(8):2754-5.
  75. Gidding HF, Wood J, MacIntyre CR, Kelly H, Lambert SB, Gilbert GL, Quinn H, McIntyre PB. Sustained measles elimination in Australia and priorities for long term maintenance. Vaccine 2007;25(18):3574-80.
  76. Merritt TD, Sintchenko V, Jelfs P, Worthing M, Robinson B, Durrheim DN, Gilbert GL. An outbreak of pulmonary tuberculosis in young Australians. Medical Journal of Australia 2007;186(5):240-2.
  77. Ridda I, MacIntyre RC, Lindley RI, McIntyre PB, Sullivan J, Gilbert G, Kovoor P, Manolias N, Fox J. Predictors of pneumococcal vaccination uptake in hospitalized patients aged 65 years and over shortly following the commencement of a publicly funded national pneumococcal vaccination program in Australia. Human Vaccines 2007;3(3):83-6.
  78. Sintchenko V, Iredell JR, Gilbert GL. Pathogen profiling for disease management and surveillance. Nature Reviews Microbiology 2007:5(6) 464-70.
  79. Slotved HC, Kong F, Lambertsen L, Sauer S, Gilbert GL. Serotype IX, a proposed new Streptococcus agalactiae serotype. J Clin Microbiol 2007;45(9):2929-36.
  80. Wang Q, Wang M, Kong F, Gilbert GL, Cao B, Wang L, et al. Development of a DNA microarray to identify the Streptococcus pneumoniae serotypes contained in the 23-valent pneumococcal polysaccharide vaccine and closely related serotypes. J Microbiol Meth 2007;68(1):128-36.
  81. Tong Z, Kong F, Wang B, Zeng X, Gilbert GL. A practical method for subtyping of Streptococcus agalactiae serotype III, of human origin, using rolling circle amplification. J Microbiol Meth 2007;70(1):39-44.
  82. Zhou F, Kong F, Tong Z, Gilbert GL. Identification of less-common Streptococcus pneumoniae serotypes by a multiplex PCR-based reverse line blot hybridization assay. J Clin Microbiol 2007;45(10):3411-5.
  83. Sintchenko V, Gilbert GL. Utility of genotyping of Mycobacterium tuberculosis in the contact investigation: A decision analysis. Tuberculosis 2007;87:176-84
  84. Darbar A, Gilbert GL. Phenotypical and genotypical characteristics of invasive group B streptococcus isolates in Western Sydney 2000-2005. Pathology 2007;39 (6) 589-93.
  85. Fernandes, CJ, O'Sullivan MV, Cai Y, Kong F, Zeng X, Gilbert GL, Kotsiou G. An agar dilution method for the detection of inducible clindamycin resistance in Staphylococcus spp. J Clin Microbiol 2007;45:4018-20.
  86. Gidding HF, Warlow M, MacIntyre CR, Backhouse J, Gilbert GL, Quinn HE, McIntyre PB. The impact of a new universal infant and school-based adolescent hepatitis B vaccination program in Australia. Vaccine 2007;25:8637-8641.
  87. Sintchenko V, Brown M, Gilbert GL. Is Bordetella pertussis susceptibility to erythromycin changing? MIC trends among Australian isolates 1971 2006 (Letter). J Antimicrob Chemother 2007;60(5):1178-9.
  88. Wang Y, Kong F, Gilbert GL, Brown M, Gao W, Yu S, Yang Y. Use of a multiplex PCR-based reverse line blot (mPCR/RLB) hybridization assay for the rapid identification of bacterial pathogens. Clin Microbiol Infect 2008;14:155-60
  89. Zhao, Z., Kong F, Zeng X, Gidding H, Morgan J, Gilbert GL. Molecular serotype and antibiotic resistance markers among invasive Streptococcus agalactiae (group B streptococcus) isolates from Australia and New Zealand. Clin Microbiol Infect 2008;14:260-267
  90. Unicomb LE, O'Reilly LC, Kirk MD, Stafford RJ, Smith HV, Becker NG, Patel MS, Gilbert GL. Risk factors for infection with Campylobacter jejuni flaA genotypes. Epidemiol Infect 2008; 136:1480-91.
  91. Newall AT, Brotherton JM, Quinn HE, McIntyre PBm Backhouse J, Gilbert L et al. Population seroprevalence of human papillomavirus types 6, 11, 16, and 18 in men, women, and children in Australia. Clin Infect Dis 2008; 46:1647-55.
  92. Fatholahzadeh B, Emaneini M, Gilbert G et al., Staphylococcal cassette chromosome mec (SCCmec) analysis and antimicrobial susceptibility patterns of methicillin-resistant Staphylococcus aureus (MRSA) isolates in Tehran, Iran. Microb Drug Resist Mech Epidemiol Dis 2008; 14: 217-20.
  93. Unicomb LE, Dalton CB, Gilbert GL, Becker NG, Patel M, and the Australian Campylobacter Subtyping Group. Risk factors for sporadic Campylobacter infection in the Hunter Region New South Wales, Australia. Foodborne Path Dis 2008;5:79-85
  94. Wang Y, Yang U, Kong F, Gilbert GL. A multiplex PCR-based reverse line blot hybridization (mPCR/RLB) assay for detection of bacterial respiratory pathogens in children with pneumonia. Pediatr Pulmonol 2008;43:150-159.
  95. Wang Q, Chiew R, Howard P, Gilbert GL. Salmonella Typing in New South Wales: Current methods and application of improved epidemiological tools, NSW Public Health Bulletin 2008; 19:24-28
  96. Gilbert. GL. Using MLVA to type strains of Salmonella Typhimurium in New South Wales. NSW Public Health Bulletin 2008;19:29-31
  97. Wang Q, Kong F, Jelfs P, Gilbert GL. Extended phage locus typing of Salmonella enterica serovar Typhimurium, using multiplex PCR-based reverse line blot hybridization. J Med Microbiol 2008;57:827-838.
  98. Moujaber T, Backhouse J, Gidding H, Quinn H, Gilbert GL, MacIntyre CR. The seroepidemiology of Helicobacter pylori in Australia. Int J Infect Dis 2008;12:500-504.
  99. Pendle S, Jelfs P, Olma T, Su Y, Gilroy N, Gilbert GL. Difficulties in detection and identification of Enterococcus faecium with low level inducible resistance to vancomycin, during a hospital outbreak. Clin Microbiol Infect 2008;14:853-857.
  100. Kong F, Lambertsen LM, Slotved H-C, Ko D, Wang H, Gilbert GL. Use of phenotypic and molecular serotype identification methods to characterize previously non-serotypeable group B streptococci (GBS). J Clin Microbiol 2008: 45:2745-50.
  101. Honsa E, Fricke T, Stephens AJ, Ko D, Kong F, Gilbert GL, Huygens F, Giffard PM. Assignment of Streptococcus agalactiae isolates to clonal complexes using a msall set of single nucleotide polymorphisms. BMC Microbiol 2008;8:140 doi:10.1186/1471-2180-8-140.
  102. Suanyuk N, Kong F, Ko D, Gilbert GL, Supamattaya K. Occurrence of rare genotypes of Strepcococcus agalactiae in cultured red tilapia Oreochromis sp. and Nile tilapia O. niloticus in Thailand – relationship to human isolates? Aquaculture 2008;284:35-40
  103. Aratchige PE, McIntyre PB, Quinn HE, Gilbert GL. Recent increases in mumps incidence in Australia: the "forgotten" age group in the 1998 Australian Measles Control Campaign. Medical Journal of Australia. 2008;189(8):434-7
  104. Sintchenko V, Coiera E, Gilbert GL. Decision support for antibiotic prescribing. Curr Opin Infect Dis. 2008; 21:573-579.
  105. Maharjan RM, Gu C, Reeves PR, Sintchenko V, Gilbert GL, Lan R. Genome-wide analysis of single nucleotide polymorphisms in Bordetella pertussis using comparative genomic sequencing. Res Microbiol 2008; 159: 602-8
  106. Dobler CC, Crawford ABH, Jelfs PJ, Gilbert GL , Marks GB. Recurrence of tuberculosis in a low incidence setting. Europ Respir J 2009; 33:160-167
  107. Gallego B, Sintchenko V, Wang Q, Hiley L, Gilbert GL, Coiera E. Biosurveillance of emerging biothreats using scalable genotype clustering. J Biomed Informatics. 2009; 42(1):66-73.
  108. Gilbert GL, Cheung P, Kerridge I. Infection control, ethics and accountability. Med J Aust 2009; 190:696-8.
  109. Chan WF, Maharjan RP, Reeves PR, Sintchenko V, Gilbert G, Lan R. Rapid and accurate typing of Bordetella pertussis targeting genes encoding acellular vaccine antigens using real time PCR and high resolution melt analysis. J Microbiol Meth 2009;77:326-9
  110. Lee AS, Jelfs P, Sintchenko V, Gilbert GL. Identification of nontuberculous mycobacteria: Utility of the GenoType Mycobacterium CM/AS assay compared to HPLC and 16S rDNA sequencing. J Med Microbiol 2009;58:900-4
  111. Ulett K. Benjamin WH, Schembri M, Kong F, Gilbert GL, Ulett G. Diversity of group B streptococcus serotypes causing urinary tract infection in adults. J Clin Microbiol 2009;47 2055-2060
  112. McKechnie M, Couldwell D, Hillman R, Feedman E, Wang H, Gilbert GL. Simultaneous identification of 14 genital micro-organisms in urine using a multiplex PCR-based reverse line blot (mPCR-RLB) assay. J Clin Microbiol 2009; 47: 1871-1877
  113. Wang H, Kong F, Wang B, Mckechnie ML, Gilbert GL. Multiplex PCR-based reverse line blot hybridization (RLB) assay to detect common genital pathogens. Int J STD & AIDS accepted 9/12/08
  114. Cai L, Kong K, Toi C, van Hal S, Gilbert GL Differentiation of Chlamydia trachomatis lymphogranuloma venereum-related serovars from other serovars using multiplex allele-specific PCR and high-resolution melting analysis, Int J STD AIDS Accepted 5/2/09
  115. Cai L, Kong F, Wang Q, Wang H, Xiao M, Sintchenko V, Gilbert GL. A new multiplex PCR-based reverse line blot hybridization (mPCR/RLB) assay for rapid staphylococcal cassette chromosome mec (SCCmec) typing. J. Med Microbiol JMM-2008-007955. in press - accepted 6/5/09
  116. Cai L, Kong F, Jelfs P, Gilbert GL, Sintchenko V. Rolling circle amplification and multiplex allele-specific PCR for rapid detection of katG and inhA gene mutations in Mycobacterium tuberculosis. Int J Med Microbiol IJMM-D-09-00012 - accepted 27/5/09
  117. Jin P, Xiao M, Kong F, Oftadeh O, Zhou F, Liu C, Gilbert GL. A simple, accurate serotype-specific PCR assay to differentiate Streptococcus pneumoniae serotypes 6A, 6B and 6C. J Clin Microbiol – accepted 9/6/09
  118. Jin P, Kong F, Xiao M, Oftedeh S, Zhou F, Liu C, Russell F, Gilbert GL First report of putative Streptococcus pneumoniae “serotype 6D” among nasopharyngeal isolates from Fijian children. J Infect Dis 43473 in press, accepted 8th June 2009.
  119. Radtke A, Kong F, Bergh K, Lyng RV, Ko D, Gilbert GL. Identification of surface-proteins of group B streptococci: serotyping versus genotyping. J Microbiol Methods, in press accepted 23rd June 2009 MIMET-S-09-00148
  120. Zhou F, Kong F, McPhie K, Ratnamohan M, Donovan L, Zeng F, Gilbert GL, Dwyer DE. Identification of 20 common human enterovirus serotypes using a RT-PCR-based reverse line blot hybridization assay. J Clin Microbiol 2009 : JCM.00823-09v1 accepted 26th June 2009. 
  121. Lin F, Sintchenko V, Kong F, Gilbert GL, Coiera E. Commonly-used molecular epidemiology markers of Streptococcus agalactiae do not appear to predict virulence. Pathology. Accepted 31/10/08.

Invited Reviews and Editorials

  1. Gilbert GL.
    Preventing perinatal B streptococcal infection: the jury is still out.
    Medical Journal of Australia 2003;178(5):199-200 (Editorial).
  2. Gilbert GL.
    Vaccines for other neonatal infections: are group B streptococcal infections vaccine-preventable?
    Expert Review of Vaccines 2004;3(4):371-4
  3. Nguyen LN, Gilbert GL, Marks GB.
    Molecular epidemiology of tuberculosis and recent developments in understanding the epidemiology of tuberculosis.
    Respirology 2004;9:313-9.
  4. Gilbert L.
    In that case: response.
    Journal of Bioethical Inquiry 2005;2(1):55.
  5. Gilbert L.
    Laboratory diagnosis of communicable diseases - pitfalls and prospects.
    New South Wales Public Health Bulletin 2006;17(3-4):52-6.
  6. Gilbert GL
    A resistant culture – “superbugs” in Australian hospitals.
    Microbiology Australia 2007; 26:182-185. (Invited Review)
  7. Gilbert GL.
    In that case: response: Public health dilemmas concerning a two-year-old hepatitis-B carrier.
    Journal of Bioethical Inquiry 2008 (in press – accepted 30-1-08). (Invited Comment)
  8. Wang Q, Chiew R, Kong F, Howard P, Gilbert GL.
    Salmonella typing in New South Wales: current methods and application of improved epidemiological tools.
    NSW Public Health Bulletin,2008;19:24-8
  9. Gilbert, G.L.
    Using MLVA to type strains of Salmonella Typhimurium in New South Wales.
    New South Wales Public Health Bulletin, 2008;19;29-31.
  10. Gilbert, G.L.
    Improving foodborne disease surveillance in NSW (Editorial).
    New South Wales Public Health Bulletin, 2008; 19; 1-2 (Guest Editorial).

Book Chapters

  1. Gilbert G.L. Selgelid M, Populations, patients, germs and genes – ethics of genomics and informatics in communicable disease control. Sintchenko V (Ed)  Infectious Disease Informatics. Springer 2010
  2. Gilbert G.L, O’Reilly M, Garland SM. Infection in Pregnancy. In “Infectious Diseases: A Clinical Approach”, 3rd Edition. Editors: Yung A, McDonald M, Spelman D, Street A, Johnson P, Sorrell T, McCormack J. IP Communications, Victoria 2010 (in press).
  3. Gilbert G.L. Foreword: In: PCR for Clinical Microbiology: An Australian and international perspective. Eds; M.Schuller, T.P. Sloots, G.S. James, C.L. Halliday, I.W.J. Carter. Springer press. ISBN 978-90-481-9038-6 e-ISBN 978-90-481-9039-3
  4. Gilbert L Duguid M. Introduction: In: Antimicrobial Stewardship in Australian Hospitals. Duguid M and Cruickshank M (eds) (2010). Antimicrobial Stewardship in Australian hospitals, Australian Commission on Safety and Quality in Health Care, Sydney
  5. Gilbert G.L. O’Reilly M, Garland SM.
    Infectious Diseases in the Pregnant Woman and her Infant.
    In Infectious Diseases: A Clinical Approach. Yung A, et al (Eds) 2005
  6. Gilbert G.L.
    Rat Bite Fever.
    In Conn’s Current Therapeutics 2005 Rakel RE, Editor. WB Saunders 2005.

Letters

  1. Tarnow-Mordi W, Isaacs D, Gilbert G, Athayde N, Stanley F.
    Effect of oral clindamycin on late miscarriage and preterm delivery.[comment].
    Lancet 2003;361(9375):21. (IF 25.8)
  2. Gilbert GL, Gidding HF, Backhouse J, McIntyre PB.
    Varicella seroprevalence and vaccine uptake in preschool children.
    Medical Journal of Australia 2005;182(1):3.
  3. Sintchenko V, Brown M, Gilbert GL.
    Is Bordetella pertussis susceptibility to erythromycin changing? MIC trends among Australian isolates 1971-2006.
    Journal of Antimicrobial Chemotherapy 2007;60(5):1178-9. (IF 3.891)

Iredell

  1. Rapid semi-automated quantitative multiplex tandem PCR (MT-PCR) assays for the differential diagnosis of influenza-like illness. Szewczuk E, Thapa K, Anninos T, McPhie K, Higgins G, Dwyer DE, Stanley KK, Iredell JR. BMC Infect Dis. 2010 May 11;10:113.
  2. ISEcp1-mediated transposition and homologous recombination can explain the context of bla(CTX-M-62) linked to qnrB2. Zong Z, Partridge SR, Iredell JR. Antimicrob Agents Chemother. 2010 Jul;54(7):3039-42.
  3. Predictors and outcome associated with an Enterococcus positive isolate during intensive care unit admission. Chatterjee I, Dulhunty JM, Iredell J, Gallagher JE, Sud A, Woods M, Lipman J. Anaesth Intensive Care. 2009 Nov;37(6):976-82.PMID: 20014605 [PubMed - indexed for MEDLINE]Related citations
  4. Comparison of a rapid antigen test with nucleic acid testing during cocirculation of pandemic influenza A/H1N1 2009 and seasonal influenza A/H3N2. Kok J, Blyth CC, Foo H, Patterson J, Taylor J, McPhie K, Ratnamohan VM, Iredell JR, Dwyer DE. J Clin Microbiol. 2010 Jan;48(1):290-1. Epub 2009 Nov 4.PMID: 19889892 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations
  5. Kyme P, Dillon B, Iredell JR. Phase variation in Bartonella henselae. Microbiology. 2003 149(3):621-9.
  6. Iredell JR, Blanckenberg D, Arvand M, Grauling S, Feil EJ, Birtles RJ. Characterization of the natural population of Bartonella henselae by multilocus sequence typing. Journal of Clinical Microbiology. 2003 41(11):5071-9.
  7. Sintchenko V, Coiera E, Iredell JR, Gilbert GL. Comparative impact of guidelines, clinical data, and decision support on prescribing decisions: an interactive web experiment with simulated cases. Journal of the American Medical Informatics Association. 2004 11(1):71-7.
  8. Rodrick D, Dillon B, Dexter M, Nicholson I, Marcel S, Dickeson D, Iredell JR. Culture-negative endocarditis due to Houston Complex Bartonella henselae acquired in Noumea, New Caledonia. Journal of Clinical Microbiology. 2004 42(4):1846-8.
  9. Dillon B, Iredell JR. DdeI RFLP for 16S rDNA typing in Bartonella henselae. Journal of Medical Microbiology. 2004 53(12):1263-5.
  10. Iredell JR, Lipman J. Antibiotic resistance in the intensive care unit: a primer in bacteriology. Anaesthesia and Intensive Care. 2005 33(2):188-95.
  11. Sintchenko V, Iredell JR, Gilbert GL, Coiera E. Handheld computer-based decision support reduces patient length of stay and antibiotic prescribing in critical care. Journal of the American Medical Informatics Association. 2005 12(4):398-402.
  12. Kyme PA, Haas A, Schaller M, Peschel A, Iredell JR, Kempf VA. Unusual trafficking pattern of Bartonella henselae-containing vacuoles in macrophages and endothelial cells. Cellular Microbiology. 2005 7(7):1019-34.
  13. Cachia AR, Eshoo S, Kench J, Fung C, Jones A, Iredell JR, Don G. Synchronous malakoplakia and Whipple's disease. Pathology. 2005 37(4):315-7.
  14. Dillon B, Thomas L, Mohmand G, Zelynski A, Iredell JR. Multiplex PCR for screening of integrons in bacterial lysates. Journal of Microbiological Methods. 2005 62(2):221-32.
  15. Dillon B, Iredell JR, Breitschwerdt EB, Maggi RB. Potential limitations of the 16S-23S rRNA intergenic region for molecular detection of Bartonella species. Journal of Clinical Microbiology. 2005 43(9):4921-2.
  16. Pendle S, Ginn A, Iredell JR. Antimicrobial susceptibility of Bartonella henselae using Etest methodology. Journal of Antimicrobial Chemotherapy. 2006 57(4):761-3.
  17. Iredell JR, Thomas L, Espedido B. β-lactams resistance in the Gram negatives: increasing complexity of conditional, composite and multiply resistant phenotypes. Pathology. 2006 38(6):498-506.
  18. Thomas L, Gidding H, Ginn A, Olma T, Iredell JR. Development of a real-time Staphylococcus aureus and MRSA (SAM-) PCR for routine blood culture. Journal of Microbiological Methods. 2007 68(2):296-302.
  19. Valenzuela JV, Thomas L, Partridge SR, van der Reijden T, Dijkshoorn L, Iredell JR. Horizontal gene transfer within a polyclonal outbreak of carbapenem-resistant Acinetobacter baumannii. Journal of Clinical Microbiology. 2007 45(2):453-60.
  20. Playford EG, Craig J, Iredell JR. Carbapenem-resistant Acinetobacter baumannii in intensive care unit patients: risk factors for acquisition, infection and their consequences. The Journal of Hospital Infection. 2007 65(3):204-11.
  21. Chatterjee I, Iredell JR, Woods M, Lipman J. The implications of enterococci for the intensive care unit. Critical Care and Resuscitation. 2007 9(1):69-75.
  22. Iredell JR, Thomas L, Power D, Mendes E. Tigecycline resistance in Australian multi-resistant Gram-negative bacteria. Journal of Antimicrobial Chemotherapy. 2007 59(4):816-8
  23. Espedido BA, Thomas LC, Iredell JR. Metallo-ß-lactamase or extended-spectrum ß-lactamase: a wolf in sheep's clothing. Journal of Clinical Microbiology. 2007 45(6):2034-6.
  24. Sintchenko V, Iredell JR, Gilbert GL. Pathogen profiling for disease management and surveillance. Nature Reviews. Microbiology. 2007 5(6):464-70.
  25. Iredell JR. Optimizing antipseudomonal therapy in critical care. Seminars in Respiratory and Critical Care Medicine. 2007 28(6):656-61
  26. Zong Z, Lü X, Valenzuela JK, Partridge SR, Iredell JR. An outbreak of carbapenem-resistant Acinetobacter baumannii producing OXA-23 carbapenemase in western China. International Journal of Antimicrobial Agents. 2008 31(1):50-4.
  27. Espedido BA, Partridge SR, Iredell JR. blaIMP-4 in different genetic contexts in Enterobacteriaceae from Australia. Antimicrobial Agents and Chemotherapy. 2008 Epub ahead of print on 19 May, doi:10.1128/AAC.01634-07.
  28. Treerat P, Widmer F, Middleton PG, Iredell JR, George AM. In vitro interactions of tobramycin with various non-antibiotics against Pseudomonas aeruginosa and Burkholderia cenocepacia. FEMS Microbiology Letters. 2008 Epub ahead of print on May 30, doi:10.1111/j.1574-6968.2008.01219.
  29. Xu X, Kong F, Cheng X, Yan B, Xin D, Gai J, Ai H, Shi L, Iredell JR. Integron gene cassettes in Acinetobacter species strains of South China International Journal of Antimicrobial Agents. 2008 (accepted May 20, 2008).
  30. Lau A, Sorrell T, Chen S, Stanley K, Iredell JR, Halliday C. Multiplex-Tandem PCR: A Novel Platform for the Rapid Detection and Identification of Fungal Pathogens from Blood Culture Specimens. J Clin Microbiol. 2008 Jul 16. [Epub ahead of print] PMID: 18632914
  31. Syrmis M, Bell S, Bye P, Coulter C, Harbour C, Iredell JR, Kidd T, O'Carroll M, Rose B, Wainwright C, Sloots T, Nissen M. High prevalence of a class 1 integron-associated aadB gene cassette in Pseudomonas aeruginosa isolates from an Australian cystic fibrosis patient population. Pathology. 2008 Aug;40(5):524-525. PMID: 18604741
  32. Chapman S, Iredell JR. Gram-negative bacterial sepsis in the critically ill Current Opinions in Infectious Diseases (accepted for publication Sept 08)
  33. Xu X, Kong F, Cheng X, Yan B, Du X, Gai J, Ai H, Shi L, Iredell JR. Integron gene cassettes in Acinetobacter spp. strains from South China. Int J Antimicrob Agents. 2008 Aug 29. [Epub ahead of print]
  34. Zong Z, Partridge SR, Thomas L, Iredell JR. Dominance of blaCTX-M within an Australian ESBL gene pool. Antimicrob Agents Chemother. 2008 Aug 25. [Epub ahead of print]
  35. Bouchillon S, Barkham T, Lee K, Iredell JR. Comparative in vitro activity of tigecycline and other antimicrobials against Gram-negative and Gram-positive organisms collected from the Asia-Pacific Rim as part of the Tigecycline Evaluation and Surveillance Trial (T.E.S.T.) Int J Antimicrob Agents Accepted July 2008 Manuscript number: IJAA-D-08-00217
  36. Partridge SR, Tsafnat G, Coiera E, Iredell JR. Gene cassettes and cassette arrays in mobile resistance integrons. FEMS Microbiol Reviews. 2009 (in press)
  37. Zong Z, Partridge SR, Iredell JR. A blaVEB-1 variant, blaVEB-6, associated with repeated elements in a complex genetic structure. Antimicrob Agents Chemother. 2009 (in press)
  38. van Hal S, Wiklendt A, Espedido B, Ginn A, Iredell JR. Immediate appearance of plasmid-mediated multiple antibiotic resistance upon antibiotic selection: an argument for systematic resistance epidemiology. J Clin Microbiol. (in press)
  39. Jiang X, Espedido B, Partridge SR, Thomas LC, Wang F, Iredell JR. Paradoxical effect of Klebsiella pneumoniae OmpK36 porin deficiency. Pathology (in press)
Meyer
  1. Blyth CC, Middleton, PG, Harun A, Sorrell TC, Meyer W, Chen SCA (in press) Clinical association and prevalence of Scedosporium spp. in Australian cystic fibrosis patients: identification of novel risk factors? Medical Mycology (accepted 9.6.2010)
  2. Trivedi SR, Sykes JE, Cannon MS, Wisner ER, Meyer W, Sturges BK, Dickinson PJ, Johnson LR (in press) Variation in clinical presentation and epidemiology of cryptococcosis in cats and dogs from California. Journal of the American Veterinary Medical Association (accepted 15.6.2010).
  3. Prevalence of the VNIc genotype of Cryptococcus neoformans in non-HIV-associated cryptococcosis in the Republic of Korea. Choi YH, Ngamskulrungroj P, Varma A, Sionov E, Hwang SM, Carriconde F, Meyer W, Litvintseva AP, Lee WG, Shin JH, Kim EC, Lee KW, Choi TY, Lee YS, Kwon-Chung KJ. FEMS Yeast Res. 2010 Sep;10(6):769-78. Epub 2010 May 19.PMID: 20561059 [PubMed - in process]Related citations
  4. Pathogenesis of Pulmonary Cryptococcus gattii Infection: A Rat Model.Krockenberger MB, Malik R, Ngamskulrungroj P, Trilles L, Escandon P, Dowd S, Allen C, Himmelreich U, Canfield PJ, Sorrell TC, Meyer W, Mycopathologia Epub 2010, June 15
  5. Comparison of different DNA-based methods for molecular typing of Histoplasma capsulatum. Muniz Mde M, Morais E Silva Tavares P, Meyer W, Nosanchuk JD, Zancope-Oliveira RM. Appl Environ Microbiol. 2010 Jul;76(13):4438-47. Epub 2010 May 7.
  6. Global VGIIa isolates are of comparable virulence to the major fatal Cryptococcus gattii Vancouver Island outbreak genotype. Ngamskulrungroj P, Serena C, Gilgado F, Malik R, Meyer W. Clin Microbiol Infect. 2010 Mar 20. [Epub ahead of print]Detection of occult Scedosporium species in respiratory tract specimens from patients with cystic fibrosis by use of selective media. Blyth CC, Harun A, Middleton PG, Sleiman S, Lee O, Sorrell TC, Meyer W, Chen SC. J Clin Microbiol. 2010 Jan;48(1):314-6. Epub 2009 Nov 11.PMID: 19906904 [PubMed - indexed for MEDLINE]
  7. Meyer W, Trilles L (2010): Genotyping of the Cryptococcus neoformans/C. gattii species complex. Australian Biochemist 41 (1): 11-15
  8. Santos WRA, Meyer W, Wanke B, Costa SPSE, Trilles L ,Nascimento JLM, Medeiros, R, Morales BP, Bezerra CCF, Macêdo RCL, Ferreira SO, Barbosa GG, Lazéra MS. Primary endemic cryptococcosis gattii by molecular type VGII in the state of Pará, Brazil, Memorias do Instituto Oswaldo Cruz. 2008;103:813-8
  9. Trilles L, Lazéra dos Santos M, Wanke B, Vasconcelo-Oliveira R, Gonçalves-Barbosa G, Penarrieta-Morales B, Meyer W: Regional pattern of the molecular types of Cryptococcus neoformans and Cryptococcus gattii in Brazil. Memorias do Instituto Oswaldo Cruz, 2008;103:455-62.
  10. Ngamskulrungroj P, Sorrell TC, Chindamporn A, Chaiprasert A, Poonwan N, Meyer W: An association between fertility and molecular sub-type of global isolates of Cryptococcus gattii molecular type VGII. Medical Mycology 2008;46:665-73
  11. Kaocharoen S, Wang B, Tsui KM, Trilles L, Kong F, Meyer W: Rolling circle amplification as a rapid and sensitive method for species identification within the Cryptococcus species complex. Electrophoresis 2008;29, 3183-3191.
  12. Hanafy A, Jover-Botella A, Katsu M, Iida S, Kogure T, Gonoi T, Mikami Y, Meyer W: Multilocus Microsatellite Typing for Cryptococcus neoformans var. grubii. Medical Mycology, 2008;46:685-96
  13. Tsui CKM, Daniel HM, Robert V, Meyer W. Reexamining the phylogeny of clinically relevant Candida species and allied genera based on multigene analyses. FEMS Yeast Res. 2008; 8:651-9
  14. Delhaes L, Harun A, Chen SCA, Nguyen Q, Slavin M, Heath CH, Maszewska K, Halliday C, Robert V, Sorrell TC, The Australian Scedosporium (AUSCEDO) Study Group & Meyer W: Molecular typing of Australian Scedosporium isolates reveals genetic variability and a substantial number of S. aurantiacum. Emerging Infectious Diseases 2008 14: 282-290.
  15. Karaoglu H, Lee CMY, Carter D, Meyer W (2008): Development of polymorphic microsatellite markers for Cryptococcus neoformans. Molecular Ecology Resources 8: 1136-1138.
  16. Tsui CKM, Daniel HM, Robert V, Meyer W (2008) Re-examining the phylogeny of clinically relevant Candida species and allied genera based on multigene analyses. FEMS yeast research 8: 651-659.
  17. Delhaes L, Harun A, Chen SCA, Nguyen Q, Slavin M, Heath CH, Maszewska K, Halliday C, Robert V, Sorrell TC, The Australian Scedosporium (AUSCEDO) Study Group & Meyer W (2008) Molecular typing of Australian Scedosporium isolates reveals genetic variability and a substantial number of S. aurantiacum. Journal of Emerging Infectious Diseases 14(2): 282-290.
  18. Escondón P, Ngamskulrungroj P, Meyer W, Castañeda E (2007) In vitro mating of Colombian isolates of the Cryptococcus neoformans speciies complex. Biomedica 27 (2): 308-314 Meyer W (2007) The emergence of Cryptococcus gattii VGII as a super killer? Microbiology Australia 28 (2): 70-71
  19. Ribeiro AM, Rosa e Silva, LK, Schrank IS, Schrank A, Meyer W, Henning Vainstein M (2006) Isolation of Cryptococcus neoformans var. neoformans serotype D from Eucalypts in South Brazil Medical Mycology, Medical Mycology, 44:707-713.
  20. Meyer W, Pearce C (2006) Proceedings of the 8th International Mycological Congress, Cairns, Australia, 20-25.8.2006 MEDIMOND, Italie (ISBN 88-7587276-7)
  21. Kluger EK, Karaoglu HK, Krockenberger MB, Della Torre PK, Meyer W, Malik R (2006) Recrudescent cryptococcosis, caused by Cryptococcus gattii (molecular type VGII), over a 13 year period in a Birman cat Medical Mycology, 44:561-566.
  22. Escandon P, Sanchez A, Martinez M, Meyer W & Castañeda E (2006) Molecular epidemiology of clinical and environmental isolates of the Cryptococcus neoformans species complex reveals a high genetic diversity and the presence of the molecular type VGII mating type a in Colombia FEMS Yeast Research 6: 625-635.
  23. Campbell LT, Currie BJ. Krockenberger M, Malik R, Meyer W, Heitman J & Carter Dee (2005) Clonality and recombination in genetically differentiated subgroups of Cryptococcus gattii Eukaryotic Cell 4(8): 1403-1409.
  24. Karaoglu H, Lee CMY & Meyer W (2005) Survey of Simple Sequence Repeats in completed Fungal Genomes Molecular Biology and Evolution, MBE 22(3): 639-649.
  25. Kidd S, Hagen F, Tscharke R, Huynh M, Bartlett K, Fyfe M, MacDougall L, Boekhout T, Kwon-Chung JK & Meyer W (2004) A rare genotype of Cryptococcus gattii caused the Cryptococcosis outbreak on Vancouver Island (British Columbia, Canada) PNAS 107(49): 17258-17263 [Evaluated by Faculty 1000: http://www.f1000biology.com/article/15572442/evaluation]
  26. Mahoney D, Gams W, Meyer W & Starink M (2004) Umbelopsis dimorpha n. sp., a link between U. vinacea and U. versiformis Mycological Research 108(1): 107-111.
  27. Igreja RP, Lazera M dos S, Wanke B, Galhardo MCG, Kidd S & Meyer W (2004)
    PCR-fingerprinting of Cryptococcus neoformans isolates from AIDS patients of the city of Rio de Janeiro. Medical Mycology 42: 229-238
  28. Katsu M, Kidd S, Ando A, Moretti-Branchini ML, Mikami Y, Nishimura K & Meyer W (2004) The Internal Transcribed Spacers and 5.8S rRNA gene show extensive diversity among isolates of the Cryptococcus neoformans species complex. FEMS Yeast Research 4: 377-388.
  29. Lachance MA, Daniel HM, Meyer W, Prasad GS, Gautam SP & Boundy-Mills K (2003) The D1/D2 domain of the large subunit rDNA of the yeast species Clavspora lusitaniae is unusually polymorphic. FEMS Yeast Research 4 (3): 253-258.
  30. Daniel HM & Meyer W (2003) Evaluation of ribosomal RNA and actin gene sequences for the identification of ascomycetous yeasts. J. International Food Microbiology 86: 61-78.
  31. Casali AK, Goulart L, Rosa e Silva LK, Ribeiro AM, Amaral AA, Alves SH, Schrank A, Meyer W, & Vainstein MH (2003) Molecular typing of clinical and environmental Cryptococcus neoformans isolates in the Brazilian State Rio Grande do Sul. FEMS Yeast Research 3 (4): 405-415.
  32. Latouche GN, Huynh M, Sorrell TC & Meyer W (2003) PCR-restriction fragment length polymorphism analysis of the phopholipase B gene (PLB1) for subtyping of Cryptococcus neoformans isolates. App. Environ. Micorbiol.69 (4): 2080-2086.
  33. Meyer W and Gams W (2003) Approaches to the classification of the Mortierella isabellina-group (Mucorales). 2. Delimitation of Umbelopsis based on ITS sequences and RFLP data. Mycological Research 107(3): 339-350.
  34. Meyer W, Castaneda A, Jackson S, Huynh M, Castaneda E and the IberoAmerican Cryptococcal Study Group (2003) Molecular typing of IberoAmerican Cryptococcus neoformans Isolates Emerging Infect. Dis.: 9(2): 189-195.
  35. Kidd SE, Sorrell TC, Meyer W (2003) A potential environmental association between Cryptococcus neoformans var. gattii and insect frass. Medical Mycology 41(2): 171-176
  1. Eisen DP, Dean MM, O'Sullivan MV, Heatley S, Minchinton RM.
    Mannose-binding lectin deficiency does not appear to predispose to cryptococcosis in non-immunocompromised patients.
    Med Mycol. 2008 Jun;46(4):371-5.
  2. Fernandes CJ, O'Sullivan MV, Cai Y, Kong F, Zeng X, Gilbert GL, Kotsiou G.
    Agar dilution method for detection of inducible clindamycin resistance in Staphylococcus spp.
    J Clin Microbiol. 2007 Dec;45(12):4018-20.
  3. O'Sullivan MV, Cai Y, Kong F, Zeng X, Gilbert GL.
    Influence of disk separation distance on accuracy of the disk approximation test for detection of inducible clindamycin resistance in Staphylococcus spp.
    J Clin Microbiol. 2006 Nov;44(11):4072-6.
  4. Ralph A, O'Sullivan MV, Sangster NC, Walker JC.
    Abdominal pain and eosinophilia in suburban goat keepers--trichostrongylosis.
    Med J Aust. 2006 May 1;184(9):467-9.
  5. Coen M, O'Sullivan M, Bubb WA, Kuchel PW, Sorrell T.
    Proton nuclear magnetic resonance-based metabonomics for rapid diagnosis of meningitis and ventriculitis.
    Clin Infect Dis. 2005 Dec 1;41(11):1582-90.
  6. O'Sullivan MV, Isbel NM, Johnson DW, Rencken K, Byrne S, Graham MM, Playford EG.
    Disseminated pyogenic Mycoplasma pneumoniae infection in a renal transplant recipient, detected by broad-range polymerase chain reaction.
    Clin Infect Dis. 2004 Nov 1;39(9):e98-9.
  7. O'Sullivan MV, Whitby M, Chahoud C, Miller SM.
    Histoplasmosis in Australia: a report of a case with a review of the literature.
    Aust Dent J. 2004 Jun;49(2):94-7.
Russell
  1. Macdonald, J., Poidinger, M., Mackenzie, J., RUSSELL, R.C., Doggett, S., Broom, A., Phillips, D., Potamski, J., Gard, G., Whelan, P., Weir, R., Young, P., Gendle, D., Maher, S., Barnard, R. and Hall, R.  2010. Molecular phylogeny of Edge Hill virus supports its position in the yellow fever virus group and identifies a new genetic variant. Evolutionary Bioinformatics 6: 91-96.
  2. Rapley LP, RUSSELL RC, Montgomery BL, Ritchie SA. The effects of sustained release metofluthrin on the biting, movement, and mortality of Aedes aegypti in a domestic setting.
    Am J Trop Med Hyg. 2009 Jul;81(1):94-9.
  3. Webb CE, RUSSELL RC. A laboratory investigation of the mosquito control potential of the monomolecular film Aquatain mosquito formula against immature stages of Aedes aegypti and Culex quinquefasciatus. J Am Mosq Control Assoc. 2009 Mar;25(1):106-9.
  4. RUSSELL RC, Currie BJ, Lindsay MD, Mackenzie JS, Ritchie SA, Whelan PI. Dengue and climate change in Australia: predictions for the future should incorporate knowledge from the past. Med J Aust. 2009 Mar 2;190(5):265-8.
  5. Disbury, M., Cane, R. and RUSSELL, R.C. Remote identification of exotic mosquito specimens using digital photography. Australian Journal of Entomology 2008, 47: 128-130.
  6. Webb, C.E. and RUSSELL, R.C. Mosquitoes of Centennial Park, Sydney. General and Applied Entomology 2008, 37: 31-33.
  7. Cashman, P., Hueston, L., Durrheim, D., Massey, P., Doggett, S. and RUSSELL, R.C. Barmah Forest virus serology; implications for diagnosis and public health action. Communicable Diseases Intelligence 2008, 32: 263-266.
  8. Webb, C.E., Doggett, S.L., Ritchie, S.A. and RUSSELL, R.C. Vector competence of three Australian mosquitoes, Verrallina carmenti, Verrallina lineata and Mansonia septempunctata (Diptera: Culicidae), for Ross River virus. Journal of Medical Entomology 2008, 45: 737-740.
  9. Ewald, B.D., Webb, C.E., Durrheim, D.N. and RUSSELL, R.C. Is there a risk of malaria transmission in NSW? NSW Public Health Bulletin 2008, 19: 127-131.
  10. Williams, C.R., Ritchie, S.A., Long, S., Dennison, N. and RUSSELL, R.C. Impact of a bifenthrin-treated lethal ovitrap on Aedes aegypti oviposition and mortality in north Queensland, Australia. Journal of Medical Entomology 2007, 44: 256-262.
  11. Williams, C.R., Long, S.A., Webb, C.E., Bitzhenner, M., Geier, M., RUSSELL, R.C. and Ritchie, S.A. Aedes aegypti population sampling using BG-Sentinel traps in north Queensland Australia: statistical considerations for trap deployment and sampling strategy. Journal of Medical Entomology 2007, 44: 345-350.
  12. Hemmerter, S., Slapeta, J., van den Hurk, A.F., Cooper, R.D., Whelan, P.I., RUSSELL, R.C., Johansen, C.A. and Beebe, N.W. A curious coincidence: mosquito biodiversity and the limits of the Japanese encephalitis virus in Australasia. BMC Evolutionary Biology 2007, 7: 100-110. Also published Online – Open Access: doi:10.1186/1471-2148-7-100
  13. Webb C.E. and RUSSELL, R.C. Is the extract from the plant catmint (Nepeta cataria) repellent to mosquitoes in Australia? Journal of the American Mosquito Control Association 2007, 23: 351-154.
  14. Craig, A., Hall, G. and RUSSELL, R. Climate Change and infectious diseases. NSW Public Health Bulletin 2007, 18: 243-244.
  15. Williams, C.R., Long, S.A., RUSSELL, R.C. and Ritchie, S.A. Field efficacy of the BG-Sentinel compared with the CDC backpack aspirator and CO2- baited EVS traps for collection of adult Aedes aegypti in Cairns, Queensland, Australia. Journal of the American Mosquito Control Association 2006, 22: 296-300.
  16. Williams, C.R., Ritchie, S.A., RUSSELL, R.C., Eiras, A.E., Kline, D.L. and Geier, M. Geographic variation in attraction to human odor compounds by Aedes aegypti mosquitoes (Diptera: Culicidae): a laboratory study. Journal of Chemical Ecology 2006, 32: 1625-1634.
  17. Ward, K., Lee, R., and RUSSELL, R.C. Malaria. NSW Public Health Bulletin 2006, 17: 57.
  18. Ritchie, S.R., Moore, P., Carruthers, M., Williams, C., Montgomery, B., Foley, P., Ahboo, S., van den Hurk, A., Lindsay M.A., Cooper, R., Beebe, N. and RUSSELL, R.C. Discovery of a widespread infestation of Aedes albopictus in the Torres Strait, Australia. Journal of the American Mosquito Control Association 2006, 22: 358-365.
  19. Doggett, S.L., Geary, M.J. and RUSSELL, R.C. Encasing mattresses in black plastic will not provide thermal control of bed bugs, Cimex spp. (Hemiptera: Cimicidae). Journal of Economic Entomology 2006, 99: 2132-2135.
  20. Williams, C.R., Long, S.A, RUSSELL, R.C. and Ritchie, S.A. Optimizing ovitrap use for Aedes aegypti in Cairns, Queensland, Australia: effects of some abiotic factors on field efficacy. Journal of the American Mosquito Control Association 2006, 22: 635-640.
  21. Williams, C.R., Bergbauer, R., Geier, M., Kline, D.L., Bernier, U.R., RUSSELL, R.C. and Ritchie, S.A. Laboratory and field assessment of some kairomone blends for host-seeking Aedes aegypti. Journal of the American Mosquito Control Association 2006, 22: 641-647.
  22. Willems, K.J., Webb, C. E. and RUSSELL, R.C. A comparison of mosquito predation by the fish Pseudomugil signifer Kner and Gambusia holbrooki (Girard) in laboratory trials. Journal of Vector Ecology 2005, 30: 87-90.
  23. Johansen, C.A., Lindsay, M.D.A., Harrington, S.A., Whelan, P.I. RUSSELL, R.C. and Broom, A.K. First record of Aedes (Aedimorphus) vexans vexans (Meigen) in Australia. Journal of the American Mosquito Control Association 2005, 21: 222-224.
  24. RUSSELL, R.C., Williams, C.R., Sutherst, R.W. and Ritchie, S.A. Aedes (Stegomyia) albopictus - a dengue threat for southern Australia? Communicable Diseases Intelligence 2005, 29: 296-298.
  25. RUSSELL, R.C., Webb, C.E. and Davies, N. Aedes aegypti (L.) and Aedes polynesiensis Marks (Diptera: Culicidae) in Moorea, French Polynesia: A study of adult population structures and pathogen (Wuchereria bancrofti and Dirofilaria immitis) infection rates to indicate regional and seasonal epidemiological risk for dengue and filariasis. Journal of Medical Entomology 2005, 42: 1045-1056.
  26. Willems, K.J., Webb, C. and RUSSELL, R.C. Tadpoles of four common Australian frogs are not effective predators of the common pest and vector mosquito Culex annulirostris. Journal of the American Mosquito Control Association 2005, 21: 492-494.
  27. RUSSELL, R.C., Webb, C.E., Williams, C.R. and Ritchie, S.A. Mark-release-recapture study to measure dispersal of the mosquito Aedes aegypti in Cairns, Queensland, Australia. Medical and Veterinary Entomology 2005, 19: 451-457.
  28. RUSSELL, R.C. and Kay, B.H. Medical Entomology: changes in the spectrum of mosquito-borne disease in Australia and other vector threats and risks, 1972-2004. Australian Journal of Entomology 2004, 43: 271-282.
  29. Doggett, S.L., Geary, M.J. and RUSSELL, R.C. The resurgence of bed bugs in Australia: with notes on their ecology and control. Environmental Health 2004, 4: 30-38.
  30. Balit, C.R., Geary, M.J., RUSSELL, R.C. and Isbister, G.K. Clinical effects of exposure to the White-Stemmed Gum Moth (Chelepteryx collesi). Emergency Medicine Australasia 2004, 16: 74-81.
  31. Klowden, M.J. and RUSSELL, R.C. Mating affects egg maturation in Anopheles gambiae Giles (Diptera: Culicidae). Journal of Vector Ecology 2004, 29: 135-139.
  32. Foley, D.H., RUSSELL, R.C. and Bryan, J.H. Population structure of the peridomestic mosquito Ochlerotatus notoscriptus in Australia. Medical and Veterinary Entomology 2004, 18: 180-190.
  33. Robertson, G.J., Doggett, S., Seeman, O., RUSSELL, R.C., Clancy, J. and Haniotis, J. Ross River virus and its vectors in Sorell Municipal Area, south-eastern Tasmania, January to March 2002. Communicable Diseases Intelligence 2004, 28: 261-266.
  34. Webb, C.E., Willems, K.J. and RUSSELL, R.C. The response of mosquitoes (Diptera: Culicidae) from the Sydney region of New South Wales to light traps baited with carbon dioxide and octenol. General and Applied Entomology 2004, 33: 69-73.
  35. Saleh, S.M., Poidinger, M., Mackenzie, J.S., Broom, A.K., Lindsay, M.D., RUSSELL, R.C., Cloonan, M.J., Calisher, C.H., Burgess, G.W. and Hall, R.A. Antigenic and genetic typing of Whataroa viruses in Australia. American Journal of Tropical Medicine and Hygiene 2004, 71: 262-267.
  36. Geary, M.J. and RUSSELL, R.C. Fly larvae for wound management: a maggot makeover. NSW Public Health Bulletin 2004, 15: 218-219.
  37. RUSSELL, R.C. The relative attractiveness of carbon dioxide and octenol in CDC- and EVS-type light traps for Aedes aegypti (L.), Aedes polynesiensis Marks and Culex quinquefasciatus Say in Moorea, French Polynesia. Journal of Vector Ecology 2004, 29: 309-314.
  38. RUSSELL, R.C. and Ritchie, S.A. Surveillance and behavioural investigations of Aedes aegypti and Aedes polynesiensis in Moorea, French Polynesia, using a sticky ovitrap. Journal of the American Mosquito Control Association 2004, 20: 370-375.

PUBLISHED CONFERENCE PAPERS

  1. Clancy, J.G. and RUSSELL, R.C. (1997).
    The "other" mosquitoes of New South Wales.
    Arbovirus Research in Australia, 7: 41-46.
  2. Doggett, S.L., Koevski, I., Haniotis, J. and RUSSELL, R.C. (1997).
    MOSAVEX: a mechanical device to grind mosquitoes for arbovirus detection.
    Arbovirus Research in Australia, 7: 75-78.
  3. Doggett, S.L. and RUSSELL, R.C. (1997).
    Aedes notoscriptus can transmit inland and coastal isolates of Ross River and Barmah Forest virus from NSW!
    Arbovirus Research in Australia, 7: 79-81.
  4. Haniotis, J., Doggett, S.L., Cloonan, M.J. and RUSSELL, R.C. (1997).
    A quality control procedure for a fixed-cell ELISA.
    Arbovirus Research in Australia, 7: 88-91.
  5. RUSSELL, R.C., Cloonan, M.J., Doggett, S.L., Clancy, J., Haniotis, J., Wells, P., Fennell, M., Cunningham, A., Hueston, L. and Marchetti, M. (1997).
    Surveillance of arboviruses and vectors in NSW, 1993-1996.
    Arbovirus Research in Australia, 7: 228-234.
  6. RUSSELL, R.C. (1997).
    Coastal development: Constructed wetlands and mosquito management.
    7th Annual New South Wales Coastal Conference, Ballina, N.S.W., 12-14th November 1997: 144-151.
  7. RUSSELL, R.C., Doggett, S.L., Clancy, J., Haniotis, J. and Cloonan, M.J. (1997).
    Mosquitoes and Barmah Forest virus: the 1995 epidemic in NSW.
    Arbovirus Research in Australia, 7: 235-239.
  8. RUSSELL, R.C. and Geary, M.J. (1997).
    Which mosquitoes are the "best" vectors of dog heartworm?
    Arbovirus Research in Australia, 7: 243-246.
  9. Webb, C. and RUSSELL, R.C. (1997).
    Investigation of the mosquito fauna and larval habitats of the saline wetlands at the Olympic site, Homebush Bay, Sydney.
    Arbovirus Research in Australia, 7: 308-310.
  10. Wells, P., Mikunda, A., Doggett, S.L., Cloonan, M.J., RUSSELL, R.C., Weir, R.C., Marshall, I.D. and Dalgarno, L. (1997).
    Studies of the infectivity of selected strains of Ross River virus in Aedes vigilax and Culex annulirostris mosquitoes collected at coastal and inland sites of New South Wales.
    Arbovirus Research in Australia, 7: 322-325.
  11. Willems, K. and RUSSELL, R.C. (1997).
    Freshwater mosquito control for the 2000 Olympics.
    Arbovirus Research in Australia, 7: 357-358.
  12. RUSSELL, R.C. (1996).
    Mosquitoes and wastewater wetlands - enhancing natural cycles of zoonotic diseases?
    Pp 68-80 in Workshop on "Wetland Systems for Wastewater Treatment", 25 September 1996, Murdoch University, Perth, WA.
  13. RUSSELL, R.C. (1995).
    Artificial wetlands and the mosquito/disease threat in southeastern Australia.
    in B.H.Kay (Ed.) Water resources: health, environment and development. Proceedings of conference, 26-28 April 1995, Townsville, Qld.
  14. RUSSELL, R.C. and DOGGETT, S.L. (1995).
    Ticks and human disease in Australia - an update.
    in L.B.Coons (Ed.) Proceedings Second International Conference on Tick-borne Pathogens at the Host-Vector Interface, 28 August - 1 Sept, 1995, Kruger National Park, South Africa
  15. RUSSELL, R.C. and Kuginis, L. (1995).
    Constructed wetlands and mosquitoes - some problems and some solutions.
    Pp 213-224 in Proceedings of the National Conference on 'Wetlands For Water Quality Control'. 25-29 September 1995, Townsville, Qld.
  16. RUSSELL, R.C. (1994).
    Ross River virus - disease trends and vector ecology in Australia.
    Bulletin of the Society for Vector Ecology. 19: 73-81. Proceedings of the First International Congress of Vector Ecology, 2-8 October 1993, San Diego, U.S.A.
  17. RUSSELL, R.C. (1994).
    Wetlands and mosquitoes - the pest and disease threats.
    Pp 45-51 in "Practical Aspects of Constructed Wetlands", Proceedings of a Workshop at Shortland Wetland Centre, Newcastle West. N.S.W. Department of Water Resources, June 1994, Newcastle, Australia.
  18. RUSSELL, R.C., Doggett, S.L., Munro, R., Dickeson, D.J., Ellis, J., Avery, D. and Hunt, C. (1994).
    Lyme disease in Australia - reasonable doubt?
    Pp 212-215. in R.Cevenini, V.Sambri and M.LaPlaca (Eds). Proceedings of the VI International Conference on Lyme Borreliosis, 19-22 June 1994, Bologna, Italy.
  19. RUSSELL, R.C. (1993).
    The search for Lyme borrelia in Australia.
    Chinese Journal of Pest Control. 9: 242-247. Proceedings of the International Vector Ecology Conference, 14 July 1992, Hainan, China.
  20. RUSSELL, R.C. (1993).
    Requirements and problems for control of some arthropod pests of medical importance in urban Australia.
    Pp 113-116 in Proceedings International Conference on Insect Pests in the Urban Environment, 30 June - 3rd July 1993, Cambridge, U.K.
  21. RUSSELL, R.C., Doggett, S.L. and Munro, R. (1993).
    Tick ecology and the search for a possible Lyme disease spirochaete in southeastern Australia.
    Bulletin of the Society for Vector Ecology. 18: 77-84. Proceedings of the VII European Meeting of the Society for Vector Ecology, 25-28 August 1992, Bologna, Italy.
  22. Clancy, J.G. and RUSSELL, R.C. (1992).
    Further investigations into the influence of temperature on populations of Culex annulirostris Skuse (Diptera: Culicidae) in New South Wales.
    Arbovirus Research in Australia, 6: 5-10.
  23. Doggett, S.L., RUSSELL, R.C., Munro, R., Dickeson, D., Ellis, J., Avery, D., Hunt, C., Simmons, J. and Trivett, N. (1992).
    Lyme disease - the search for the causative agent in southeastern Australia.
    Arbovirus Research in Australia, 6: 313-315.
  24. Mackenzie, J.S., Broom, A.K., Calisher, C.H., Cloonan, M.J., Cunningham, A.L., Gibson, C.A., Hueston, L., Lindsay, M.D., Marshall, I.D., Phillips, D.A., RUSSELL, R.C., Sheridan, J., Smith, D.W., Smythe, L., Vitarana, T. and Worswick, D. (1992).
    Diagnosis and reporting of arbovirus infections in Australia.
    Arbovirus Research in Australia, 6: 89-93.
  25. McManus, T.J., RUSSELL, R.C., Wells, P.J., Clancy, J.G., Fennell, M. and Cloonan, M.J. (1992).
    Further studies on the epidemiology and effects of Ross River virus in Tasmania.
    Arbovirus Research in Australia, 6: 68-72.
  26. RUSSELL, R.C., Doggett, S., Dickeson, D., Hunt, C. and Munro R. (1992).
    Lyme disease and Australia - the current situation.
    Pp 265-79. in The Proceedings of the Australian Tropical Health and Nutrition Conference, 4-6 Nov 1991, Brisbane.
  27. RUSSELL, R.C., Wells, P.J., Clancy, J.G., Naim, H.N., Marchetti, M., Fennell, M., Hueston, L., Cloonan, M.J., Hawkes, R.A. and Cunningham, A.L. (1992).
    The surveillance of arbovirus activity in N.S.W. 1989-1992.
    Arbovirus Research in Australia, 6: 76-80.
  28. Wells, P.J., RUSSELL, R.C. and Cloonan, M.J. (1992).
    Investigating vector competence of Culex annulirostris and Aedes vigilax for Ross River virus and other alpha- and bunyaviruses.
    Arbovirus Research in Australia, 6: 10-14.
  29. Wells, P.J., RUSSELL, R.C., Cloonan, M.J., Hueston, L. and Geary, M.J. (1992).
    Vector competence of Aedes alternans for Ross River virus.
    Arbovirus Research in Australia, 6: 320.
  30. RUSSELL, R.C. (1991).
    Requirements and procedures for aircraft disinsection in the Asia-Pacific region.
    Pp 266-70, in Proceedings of the First Asia-Pacific Conference of Entomology, November 8-13 1989, Chiang Mai, Thailand.
  31. RUSSELL, R.C. (1991).
    Introduced vector borne diseases in the Pacific.
    in Micronesica Supplement 3 : 33-39. The Proceedings of the Pacific Science Association Scientific Committee for Entomology Workshop on Exotic Pests in the Pacific - Problems and Solutions'. May 31- June 1, 1990, Guam.
  32. RUSSELL, R.C. (1991).
    Arbovirus activity in southeastern Australia.
    in Bulletin of the Society for Vector Ecology, 16 : 222-26. Proceedings of the 22nd Annual Conference of the Society for Vector Ecology, 10-14 November, 1990, Mesa, Arizona, USA.
  33. RUSSELL, R.C. (1991).
    The Lyme disease situation in Australia.
    in Bulletin of the Society for Vector Ecology, 16 : 227-29. Proceedings of the 22nd Annual Conference of the Society for Vector Ecology, 10-14 November, 1990, Mesa, Arizona, USA
  1. Wang T, Kong F, Chen S, Xiao M, Sorrell T, Wang X, Wang S, Sintchenko V. Improved identification of Gordonia, Rhodococcus and Tsukamurella Species by 5’-end 16S rRNA gene sequencing. Pathology (Accepted 7 Sept 2010).
  2. Octavia S, Maharjan RP, Sintchenko V, Stevenson G, Reeves PR, Gilbert GL, Lan R. Insight into evolution of Bordetella pertussis from comparative genomic analysis: vaccine-driven selection of a major clone? Molecular Biology & Evolution (Accepted 4 Sept 2010).
  3. Kong F, Wang H, Zhang E, Sintchenko V, Xiao M, Sorrell TC, Chen X, Chen SCA. SecA1 Gene Sequence Polymorphisms for species identification of Nocardia and recognition of intraspecies genetic diversity. Journal of Clinical Microbiology (Accepted 23 Aug 2010).
  4. Liu Y, Kong F, Xiao M, Wang Q, O'Sullivan M, Sintchenko V, Ma L, Gilbert GL. Unexpected diversity of staphylococcal cassette chromosome mec (SCCmec) type IV in methicillin-resistant Staphylococcus aureus. Journal of Clinical Microbiology 2010 (Accepted 15 July 2010).
  5. Helal M, Sintchenko V. Dynamic programming algorithms for discovery of antibiotic resistance in microbial genomes. Electronic Journal of Health Informatics 2010 (Accepted April 2010)
  6. O'Sullivan MVN, Kong F, Sintchenko V, Gilbert GL. Identification of MRSA transmission in hospitals: Enhancing phage-derived ORF typing with multiplex PCR and reverse line blot assay. Journal of Clinical Microbiology 2010 (Accepted 25 Feb 2010).
  7. Blyth CC, Foo H, van Hal SJ, Hurt AC, Barr IG, McPhie K, Armstrong PK, Rawlinson WD, Sheppeard V, Conaty S, Staff M, Dwyer DE; World Youth Day 2008 Influenza Study Group. Influenza outbreaks during World Youth Day 2008 mass gathering. Emerging Infectious Diseases 2010; 16(5):809-815.
  8. Sintchenko V, Anthony S, Phan X-H, Lin F, Coiera EW. A PubMed-wide associational study of infectious diseases. PLoS ONE 2010; 5(3):e9535.
  9. Wang X, Xiao M, Kong F, Sintchenko V, Wang H, Wang B, Lian S, Sorrell T, Chen S.. Reverse line blot hybridization (RLB) and DNA sequencing studies of the 16S-23S rRNA gene intergenic spacer (ITS) regions of five emerging pathogenic Nocardia species. Journal of Medical Microbiology 2010;59:548-555.
  10. Xiao M, Kong F, Sorrell TC, Cao Y, Lee OC, Liu Y, Sintchenko V, Chen SCA. Identification of pathogenic Nocardia species by reverse line blot hybridization targeting the 16S rDNA and 16S-23S rDNA spacer regions. Journal of Clinical Microbiology 2010;48(2):503-511. 
  11. Gallego B, Sintchenko V, Jelfs P, Coiera E, Gilbert GL. Three-year longitudinal study of genotypes of Mycobacterium tuberculosis in a low prevalence population. Pathology 2010; 42(3):267-272.
  12. Couldwell DL, Gidding HF, Freedman EV, McKechnie ML, Biggs K, Sintchenko V, Gilbert GL. Ureaplasma urealyticum is significantly associated with key symptoms and signs of non-gonococcal urethritis in heterosexual Sydney men. International Journal of STD and AIDS 2010; 21(5):337-341.
  13. Kurniawan J, Maharjan RP, Reeves PR, Sintchenko V, Gilbert GL, Mooi F, Lan R. Predominant clones of Bordetella pertussis identified by Multiple-Locus Variable-Number Tandem Repeat Analysis. Emerging Infectious Diseases 2010;16(2):297-300.
  14. Sintchenko V and Coiera W. Which clinical decisions benefit from automation? A task complexity approach. International Journal of Medical Informatics 2003;70:309-316.
  15. Sintchenko V, Coiera E. Which clinical decisions benefit from automation? A task
    Tarnow-Mordi W, Isaacs D, Gilbert G, Athayde N, and Stanley F. Effect of oral clindamycin on late miscarriage and preterm delivery. Lancet, 2003;361:2161.
  16. Sintchenko V, Coiera E, Iredell JR, Gilbert GL. Comparative impact of guidelines, clinical data, and decision support on prescribing decisions: an interactive web experiment with simulated cases. J Am Med Inform Assoc. 2004; 11(1):71-7. Epub 2003 Oct 5.
  17. Sintchenko V, Iredell JR, Gilbert GL, Coiera E. Handheld computer-based decision support reduces patient length of stay and antibiotic prescribing in critical care. Journal of American Association of Medical Informatics 2005;12:398-402.
  18. Sintchenko V, Gilbert GL. Utility of genotyping of Mycobacterium tuberculosis in the contact investigation: A decision analysis. Tuberculosis 2005.
  19. Sintchenko V, Iredell JR, Gilbert GL, Coiera E. Handheld computer-based decision support reduces patient length of stay and antibiotic prescribing in critical care. JAMIA 2005;12:398-402.
  20. Iredell J, Sintchenko V. Screening for carbapenemases in Gram-negative bacteria. Lancet Infect Dis. 2006 Jun; 6(6):316-7.
  21. Jelfs P, Sintchenko V, Gilbert GL. Genotyping of Mycobacterium tuberculosis in New South Wales: Results from 18 months of statewide trial. NSW Public Health Bulletin 2006;17(5-6):81-85.
  22. Sintchenko V, Persson L, Lanser J. Communicable disease informatics – Emerging concepts in disease surveillance. In: Westbrook J & Callen J (Eds). Bridging digital divide: Clinician, consumer and computer/Proceedings of the 14th National Health Informatics Conference. Sydney, 20-22 Aug 2006. HISA, Melbourne. PP.30-35.
  23. Sintchenko V, Gilbert G.L. Utility of genotyping of Mycobacterium tuberculosis in the contact investigation: A decision analysis. Tuberculosis 2007;87:176-84
  24. Cai Y, Kong F, Wang Q, Tong Z, Sintchenko V, Zeng X, Gilbert G.L. Comparison of single- and multilocus sequence typing and toxin gene profiling for characterization of methicillin-resistant Staphylococcus aureus. J Clin Microbiol 2007;45(10):3302-8.
  25. Sintchenko V, Iredell JR, Gilbert G.L. Pathogen profiling for disease management and surveillance. Nature Reviews Microbiology 2007:5(6) 464-70.
  26. Sintchenko V, Brown M, Gilbert G.L. Is Bordetella pertussis susceptibility to erythromycin changing? MIC trends among Australian isolates 1971 2006 (Letter). J Antimicrob Chemother 2007;60(5):1178-9.
  27. Sintchenko V. Magrabi F, Tipper S. Are we measuring the right thing? Variables that affect the impact of computerized decision support on patient outcomes: A systematic review. Medical Informatics and The Internet in Medicine 2007;32(3):225-40.
  28. Coiera E, Magrabi F, Sintchenko V, Zrimec T, McDonnell G, Chung G, Tsafnat G. The Centre for Health Informatics at the University of New South Wales – a clinical informatics research centre. Methods of Information in Medicine 2007 46 Suppl.1: IMIA Yearbook of Medical Informatics; 159-166.\
  29. Dwyer DE, Sintchenko V. Point-of-care testing for community-acquired pneumonia: Do we have all the answers? Medical Journal of Australia 2007; 187:40-42.
  30. Sintchenko V, Coiera E, Gilbert G.L. Decision support for antibiotic prescribing. Curr Opin Infect Dis. 2008; 21:573-579.
  31. Maharjan RM, Gu C, Reeves PR, Sintchenko V, Gilbert G.L, Lan R. Genome-wide analysis of single nucleotide polymorphisms in Bordetella pertussis using comparative genomic sequencing. Res Microbiol 2008; 159: 602-8
  32. Sintchenko V, Gallego B, Chung G, Coiera E. Towards bioinformatics assisted infectious disease control. BMC Bioinformatics 2008;10:S10.
  33. Lin F, Sintchenko V, Kong F, Gilbert G.L, Coiera E. Commonly-used molecular epidemiology markers of Streptococcus agalactiae do not appear to predict virulence. Pathology. Accepted 31/10/08.
  34. van Hal SJ, Foo H, Blyth CC, McPhie K, Armstrong P, Sintchenko V, Dwyer DE. Influenza outbreak during Sydney World Youth Day 2008: the utility of laboratory testing and case definitions on mass gathering outbreak containment. PLoS One. 2009 Sep 3;4(9):e6620.
  35. Kong F, Chen SC, Chen X, Sintchenko V, Halliday C, Cai L, Tong Z, Lee OC, Sorrell TC.Assignment of Reference 5'-end 16S rDNA Sequences and Species-Specific Sequence Polymorphisms Improves Species Identification of Nocardia. Open Microbiol J. 2009 Jun 23;3:97-105.
  36. Cai L, Kong F, Jelfs P, Gilbert GL, Sintchenko V. Rolling circle amplification and multiplex allele-specific PCR for rapid detection of katG and inhA gene mutations in Mycobacterium tuberculosis. Int J Med Microbiol. 2009 Jul 13. [Epub ahead of print]
  37. Cai L, Kong F, Wang Q, Wang H, Xiao M, Sintchenko V, Gilbert GL. A new multiplex PCR-based reverse line-blot hybridization (mPCR/RLB) assay for rapid staphylococcal cassette chromosome mec (SCCmec) typing. J Med Microbiol. 2009 Aug;58(Pt 8):1045-57. Epub 2009 Jun 15.
  38. Lee AS, Jelfs P, Sintchenko V, Gilbert GL. Identification of non-tuberculous mycobacteria: utility of the GenoType Mycobacterium CM/AS assay compared with HPLC and 16S rRNA gene sequencing. J Med Microbiol. 2009 Jul;58(Pt 7):900-4. Epub 2009 Jun 5.
  39. Sintchenko V, Gallego B Laboratory-guided detection of disease outbreaks: three generations of surveillance systems. Arch Pathol Lab Med. 2009 Jun;133(6):916-25. Review.
  40. Chan WF, Maharjan RP, Reeves PR, Sintchenko V, Gilbert GL, Lan R Rapid and accurate typing of Bordetella pertussis targeting genes encoding acellular vaccine antigens using real time PCR and High Resolution Melt analysis. J Microbiol Methods. 2009 Jun;77(3):326-9. Epub 2009 Mar 31.
  41. Lin FP, Coiera E, Lan R, Sintchenko V. In silico prioritisation of candidate genes for prokaryotic gene function discovery: an application of phylogenetic profiles. BMC Bioinformatics. 2009 Mar 17;10:86.
  42. Sintchenko V, Gallego B, Chung G, Coiera E. Towards bioinformatics assisted infectious disease control. BMC Bioinformatics. 2009 Feb 5;10 Suppl 2:S10.
  43. Sintchenko V. The re-emergence of pertussis: implications for diagnosis and surveillance.
    N S W Public Health Bull. 2008 Jul-Aug;19(7-8):143-5
  44. Sintchenko V, Coiera E, Gilbert GL Decision support systems for antibiotic prescribing.
    Curr Opin Infect Dis. 2008 Dec;21(6):573-9. Review
  45. Maharjan RP, Gu C, Reeves PR, Sintchenko V, Gilbert GL, Lan R. Genome-wide analysis of single nucleotide polymorphisms in Bordetella pertussis using comparative genomic sequencing. Res Microbiol. 2008 Nov-Dec;159(9-10):602-8. Epub 2008 Aug 26.
  46. Gallego B, Sintchenko V, Wang Q, Hiley L, Gilbert GL, Coiera E. Biosurveillance of emerging biothreats using scalable genotype clustering. J Biomed Inform. 2009 Feb;42(1):66-73. Epub 2008 Jul 29.

TANIA SORRELL

  1. SecA1 Gene Sequence Polymorphisms for Species Identification of Nocardia and ecognition of Intraspecies Genetic Diversity. Kong F, Wang H, Zhang E, Sintchenko V, Xiao M, Sorrell TC, Chen X, Chen SC. J Clin Microbiol. 2010 Sep 1. [Epub ahead of print]PMID: 20810768 [PubMed - as supplied by publisher]Related citations

 

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CIDM Staff